RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PADI4Q9UM07 663 aa7.08□□□□□ -1.28
USP28-207ENST00000538475 TRIM33Q9UPN9 1127 aa7.08□□□□□ -1.28
USP28-207ENST00000538475 SORCS3Q9UPU3 1222 aa7.08□□□□□ -1.28
USP28-207ENST00000538475 TMED5Q9Y3A6 229 aa7.08□□□□□ -1.28
USP28-207ENST00000538475 NAV1Q8NEY1 1877 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CALUO43852 315 aaPredicted RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 PDE8AO60658 829 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CIB2O75838 187 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 HAUS5O94927 633 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 EIF2S1P05198 315 aaKnown RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 KRT13P13646 458 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 VAV1P15498 845 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 NPR3P17342 541 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 PON1P27169 355 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 EPHB2P29323 1055 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 PHKA1P46020 1223 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CD97P48960 835 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 DNA2P51530 1060 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CTSWP56202 376 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 HPCAP84074 193 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 DCTN2Q13561 401 aaKnown RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 KYNUQ16719 465 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 KBTBD12Q3ZCT8 623 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 DNAL1Q4LDG9 190 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 KHDC1Q4VXA5 237 aaKnown RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 SOGA3Q5TF21 947 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CCDC62Q6P9F0 684 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 XKR5Q6UX68 686 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 PI16Q6UXB8 463 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 KIF6Q6ZMV9 814 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 ANKS1BQ7Z6G8 1248 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CLNKQ7Z7G1 428 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 NOP9Q86U38 636 aaKnown RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 TMPRSS6Q8IU80 811 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CCDC105Q8IYK2 499 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 SYCP3Q8IZU3 236 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 VPS52Q8N1B4 723 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 THEMISQ8N1K5 641 aaPredicted RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 PRELID2Q8N945 189 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 C1orf127Q8N9H9 656 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 SUPT20HQ8NEM7 779 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 SLC35G2Q8TBE7 412 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 MAML1Q92585 1016 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 MCUR1Q96AQ8 359 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 DNAJC19Q96DA6 116 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CFAP57Q96MR6 1250 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 MTMR9Q96QG7 549 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 FNBP1Q96RU3 617 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 SETDB2Q96T68 719 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 ECSITQ9BQ95 431 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 ZSWIM1Q9BR11 485 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 SYT11Q9BT88 431 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CADM1Q9BY67 442 aaKnown RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 STK33Q9BYT3 514 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 OSBPL8Q9BZF1 889 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 C1orf21Q9H246 121 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 VPS11Q9H270 941 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 KCTD10Q9H3F6 313 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 PREBQ9HCU5 417 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 TRPV5Q9NQA5 729 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 ARPP21Q9UBL0 812 aaPredicted RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
USP28-207ENST00000538475 ZMYM2Q9UBW7 1377 aa7.07□□□□□ -1.28
USP28-207ENST00000538475 H3BRB1 525 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 FSCN2O14926 492 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 TM9SF1O15321 606 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 GYG2O15488 501 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 EXOC3O60645 756 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 CBFA2T3O75081 653 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 TBX10O75333 385 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 ATP6V1G1O75348 118 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 ENTPD5O75356 428 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 GZMAP12544 262 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 XRCC5P13010 732 aaKnown RBP7.06□□□□□ -1.28
USP28-207ENST00000538475 TSHRP16473 764 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 FOXN2P32314 431 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 SOX5P35711 763 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 RPL5P46777 297 aaKnown RBP7.06□□□□□ -1.28
USP28-207ENST00000538475 INHBCP55103 352 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 GPSM2P81274 684 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 PDE1BQ01064 536 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 COASYQ13057 564 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 MED21Q13503 144 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 EPHA7Q15375 998 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 BMT2Q1RMZ1 405 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 INF2Q27J81 1249 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 CLEC16AQ2KHT3 1053 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 WDR72Q3MJ13 1102 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 ACSBG2Q5FVE4 666 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 NLRP9Q7RTR0 991 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 TRABD2AQ86V40 505 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 SPATA24Q86W54 205 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 SLC13A5Q86YT5 568 aaPredicted RBP7.06□□□□□ -1.28
USP28-207ENST00000538475 GLYCTKQ8IVS8 523 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 NUP93Q8N1F7 819 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 ALLCQ8N6M5 410 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 TTC8Q8TAM2 541 aa7.06□□□□□ -1.28
USP28-207ENST00000538475 CCDC110Q8TBZ0 833 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms