RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZNF521Q96K83 1311 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 EIF4G3O43432 1585 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FAM196BA6NMK8 535 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 EVPLLA8MZ36 301 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 RTN2O75298 545 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 USP11P51784 963 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 DGUOKQ16854 277 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SPDYE7PQ495Y7 208 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 AGKQ53H12 422 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SLFN13Q68D06 897 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 BABAM1Q9NWV8 329 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MRPL11Q9Y3B7 192 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 KCNN4O15554 427 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SRGNP10124 158 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FCER1AP12319 257 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TALDO1P37837 337 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 HSPA2P54652 639 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ADAM17P78536 824 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MIGA2Q7L4E1 593 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 BTBD10Q9BSF8 475 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CCSER2Q9H7U1 834 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF233A6NK53 670 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 XPAP23025 273 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ANXA13P27216 316 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TCP10Q12799 353 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ZBTB33Q86T24 672 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FSD1LQ9BXM9 530 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 NRDE2Q9H7Z3 1164 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ARMCX1Q9P291 453 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 VWA5AO00534 786 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 RTN3O95197 1032 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 IL6P05231 212 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 DRD4P21917 467 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 IST1P53990 364 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ABATP80404 500 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MAPK7Q13164 816 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SLC18A3Q16572 532 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ZFP69Q49AA0 526 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 C18orf8Q96DM3 657 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 LRRC4Q9HBW1 653 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF518AQ6AHZ1 1483 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ATP10DQ9P241 1426 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ADGRA2Q96PE1 1338 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 DPPA5A6NC42 116 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ABLIM1O14639 778 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ATP12AP54707 1039 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CSE1LP55060 971 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SNAP25P60880 206 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 HACE1Q8IYU2 909 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SPICE1Q8N0Z3 855 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 NDUFAF2Q8N183 169 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 LCORLQ8N3X6 602 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TPCN2Q8NHX9 752 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 YME1L1Q96TA2 773 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PAGR1Q9BTK6 254 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 STK33Q9BYT3 514 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 DNAAF2Q9NVR5 837 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC59Q9P031 241 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 DMGDHQ9UI17 866 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ADAM30Q9UKF2 790 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PNMA3Q9UL41 463 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 COL6A6A6NMZ7 2263 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 EDC4Q6P2E9 1401 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 POTECB2RU33 542 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 F8W8V4 182 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FOXN3O00409 490 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ARIH2O95376 493 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FAM153BP0C7A2 387 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 KRT20P35900 424 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 GEMIN4P57678 1058 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 NAA20P61599 178 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FAM153CQ494X1 144 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 RIPOR1Q6ZS17 1223 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 NEK10Q6ZWH5 1172 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CDKL3Q8IVW4 592 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 COA7Q96BR5 231 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 KANSL2Q9H9L4 492 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 LGR6Q9HBX8 967 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TTC37Q6PGP7 1564 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SPATA31E1Q6ZUB1 1445 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 THRAP10827 490 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 OSBPP22059 807 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 USP4Q13107 963 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TMEM270Q6UE05 265 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TRIM72Q6ZMU5 477 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 BBS5Q8N3I7 341 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 C7orf31Q8N865 590 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CCSER1Q9C0I3 900 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MAGI2Q86UL8 1455 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 YTHDC2Q9H6S0 1430 aaKnown RBP5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PLEKHG1Q9ULL1 1385 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 STK36Q9NRP7 1315 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 SCN5AQ14524 2016 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PTGES3LE9PB15 166 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 E9PBE3 544 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 PDE9AO76083 593 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TUBA1BP68363 451 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 TUBA1AQ71U36 451 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms