RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 CHD5Q8TDI0 1954 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 MGEA5O60502 916 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 CD4P01730 458 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 CALB1P05937 261 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 RARBP10826 455 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 VDRP11473 427 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 PRKAR2AP13861 404 aaKnown RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 TFAMQ00059 246 aaKnown RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 ANKS1BQ7Z6G8 1248 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 CPA5Q8WXQ8 436 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 ZNF653Q96CK0 615 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 ADPGKQ9BRR6 497 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 RNF39Q9H2S5 420 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 PLEKHA4Q9H4M7 779 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 PAK6Q9NQU5 681 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 DCAF8L1A6NGE4 600 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 SIGLEC16A6NMB1 481 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 CXCR5P32302 372 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 RAP1GAPP47736 663 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 MNX1P50219 401 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 DRG2P55039 364 aaKnown RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 LPIN1Q14693 890 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 ZNF667Q5HYK9 610 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 NAA35Q5VZE5 725 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 TOP6BLQ8N6T0 577 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 C7orf31Q8N865 590 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 HERPUD2Q9BSE4 406 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 TRIM7Q9C029 511 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 XPNPEP3Q9NQH7 507 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 STIM2Q9P246 746 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 NR2E1Q9Y466 385 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 MICAL2O94851 1124 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 ABCB4P21439 1286 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 SSR1P43307 286 aaKnown RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 ZNF268Q14587 947 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 STILQ15468 1287 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 DRICH1Q6PGQ1 229 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 DPH6Q7L8W6 267 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 POLNQ7Z5Q5 900 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 TMEM110Q86TL2 294 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 LINC01599Q8WXQ3 324 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 C18orf25Q96B23 403 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 RNPC3Q96LT9 517 aaKnown RBP8.47□□□□□ -1.05
COL21A1-212ENST00000535941 IMPG2Q9BZV3 1241 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 FAM107BQ9H098 131 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 SLC24A3Q9HC58 644 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 PARVAQ9NVD7 372 aa8.47□□□□□ -1.05
COL21A1-212ENST00000535941 A0A087WUV0 522 aaPredicted RBP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 TMCO5BA8MYB1 307 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 ZNF487B1APH4 448 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 PPP1R12AO14974 1030 aaPredicted RBP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 MED7O43513 233 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 PHACTR2O75167 634 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 ERBB2P04626 1255 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 CYP11A1P05108 521 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 GLI1P08151 1106 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 SETSIPP0DME0 302 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 FGFR1P11362 822 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 KRT5P13647 590 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 HSPA6P17066 643 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 PAX3P23760 479 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 RDXP35241 583 aaKnown RBP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 PNPLA4P41247 253 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 MATR3P43243 847 aaKnown RBP eCLIP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 MBTPS1Q14703 1052 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 SPDYCQ5MJ68 293 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 ARTNQ5T4W7 220 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 LLGL2Q6P1M3 1020 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 PRELID2Q8N945 189 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 PCSK9Q8NBP7 692 aaKnown RBP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 SLAIN1Q8ND83 568 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 FEZF2Q8TBJ5 459 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 MRPL45Q9BRJ2 306 aaKnown RBP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 AGO3Q9H9G7 860 aaKnown RBP8.46□□□□□ -1.05
COL21A1-212ENST00000535941 GIT1Q9Y2X7 761 aa8.46□□□□□ -1.05
COL21A1-212ENST00000535941 H0YHG0 523 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 H3BQF6 201 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 PGK1P00558 417 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 PYGMP11217 842 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 HARSP12081 509 aaKnown RBP8.46□□□□□ -1.06
COL21A1-212ENST00000535941 MCM3P25205 808 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 VEGFBP49765 207 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 LIG3P49916 1009 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 GUCY2FP51841 1108 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
COL21A1-212ENST00000535941 ACAP1Q15027 740 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 LONRF2Q1L5Z9 754 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 CXCL17Q6UXB2 119 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 AGMOQ6ZNB7 445 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 CATSPER4Q7RTX7 472 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 C1orf131Q8NDD1 294 aaKnown RBP8.46□□□□□ -1.06
COL21A1-212ENST00000535941 CD99L2Q8TCZ2 262 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 CENPIQ92674 756 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms