RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 POTEHQ6S545 545 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 TMEM105Q8N8V8 129 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 PLEKHO2Q8TD55 490 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 TMC2Q8TDI7 906 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 ZNF516Q92618 1163 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 E2F7Q96AV8 911 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 FUBP3Q96I24 572 aaKnown RBP eCLIP17.83■□□□□ 0.44
PKP3-209ENST00000533069 SHDQ96IW2 340 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 GCNAQ96QF7 691 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 PKMYT1Q99640 499 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 LPIN3Q9BQK8 851 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 SLITRK6Q9H5Y7 841 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 VRTNQ9H8Y1 702 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 TMLHEQ9NVH6 421 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 CDH9Q9ULB4 789 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 CA14Q9ULX7 337 aa17.83■□□□□ 0.44
PKP3-209ENST00000533069 NRG2O14511 850 aaPredicted RBP17.82■□□□□ 0.44
PKP3-209ENST00000533069 TACC1O75410 805 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 SMC2O95347 1197 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 GJA1P17302 382 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 RPL13P26373 211 aaKnown RBP17.82■□□□□ 0.44
PKP3-209ENST00000533069 CDC25CP30307 473 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 CASP4P49662 377 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 WDR72Q3MJ13 1102 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 CEP135Q66GS9 1140 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 PHLDB3Q6NSJ2 640 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 C4orf50Q6ZRC1 276 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 SPATA2LQ8IUW3 424 aaPredicted RBP17.82■□□□□ 0.44
PKP3-209ENST00000533069 PRSS33Q8NF86 280 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 ZSCAN18Q8TBC5 510 aaPredicted RBP17.82■□□□□ 0.44
PKP3-209ENST00000533069 DEPDC1BQ8WUY9 529 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 SYT15Q9BQS2 421 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 PI4K2AQ9BTU6 479 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 GTPBP4Q9BZE4 634 aaKnown RBP17.82■□□□□ 0.44
PKP3-209ENST00000533069 IRF2BPLQ9H1B7 796 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 ATXN3LQ9H3M9 355 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 ZNF334Q9HCZ1 680 aaPredicted RBP17.82■□□□□ 0.44
PKP3-209ENST00000533069 ZMYM5Q9UJ78 669 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 ZNF318Q5VUA4 2279 aa17.82■□□□□ 0.44
PKP3-209ENST00000533069 MUC6Q6W4X9 2439 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 NOTCH4Q99466 2003 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 IKBKBO14920 756 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 GALR2O43603 387 aaPredicted RBP17.81■□□□□ 0.44
PKP3-209ENST00000533069 NR2F2P24468 414 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 GABRR2P28476 465 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 MYL6P60660 151 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 PRKCQQ04759 706 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 ENPEPQ07075 957 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 PNOCQ13519 176 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 TDRD10Q5VZ19 366 aaKnown RBP17.81■□□□□ 0.44
PKP3-209ENST00000533069 FAM171BQ6P995 826 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 GAREM2Q75VX8 874 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 DNASE1L2Q92874 299 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 ZSWIM3Q96MP5 696 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 GSDMAQ96QA5 445 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 XYLT2Q9H1B5 865 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 NUP62CLQ9H1M0 184 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 SNX25Q9H3E2 840 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 TBC1D17Q9HA65 648 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 MAPK8IP1Q9UQF2 711 aa17.81■□□□□ 0.44
PKP3-209ENST00000533069 MYBPHLA2RUH7 354 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 STK25O00506 426 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 CSH1P0DML2 217 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 CSH2P0DML3 217 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 MAGEA11P43364 429 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 CDR1P51861 262 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 STARD6P59095 220 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 NHLH1Q02575 133 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 NCOA4Q13772 614 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 ZNF699Q32M78 642 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 EDRF1Q3B7T1 1238 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 ZACNQ401N2 412 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 ZCWPW2Q504Y3 356 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 INTS8Q75QN2 995 aaKnown RBP17.8■□□□□ 0.44
PKP3-209ENST00000533069 GIPC2Q8TF65 315 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 TRMT61BQ9BVS5 477 aaKnown RBP17.8■□□□□ 0.44
PKP3-209ENST00000533069 PLA2G2FQ9BZM2 168 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 CLSTN2Q9H4D0 955 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 IL21Q9HBE4 155 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 ZDBF2Q9HCK1 2354 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 KMT2EQ8IZD2 1858 aa17.8■□□□□ 0.44
PKP3-209ENST00000533069 C4BPAP04003 597 aaKnown RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 PSMC3P17980 439 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 CYP2F1P24903 491 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 LMO2P25791 158 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 WEE1P30291 646 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 GNL1P36915 607 aaPredicted RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 PSMC1P62191 440 aaKnown RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 DLG4P78352 724 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 MLF2Q15773 248 aaPredicted RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 COBLL1Q53SF7 1204 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 ZNF667Q5HYK9 610 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 VSTM1Q6UX27 236 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 SPATA20Q8TB22 786 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 MYCBPAPQ8TBZ2 947 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 TAF4BQ92750 862 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 IRF7Q92985 503 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms