RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 WDR33Q9C0J8 1336 aaKnown RBP8.83□□□□□ -1
CSDE1-213ENST00000530784 A0A087X1B8 175 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 RAMP2O60895 175 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 SPDEFO95238 335 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 ZEB1P37275 1124 aaPredicted RBP8.83□□□□□ -1
CSDE1-213ENST00000530784 FSTL1Q12841 308 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 TP53BP2Q13625 1128 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 RAB39AQ14964 217 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 ZBTB46Q86UZ6 589 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 CMTR2Q8IYT2 770 aaKnown RBP8.83□□□□□ -1
CSDE1-213ENST00000530784 TBC1D15Q8TC07 691 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 CHMP4CQ96CF2 233 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 MARS2Q96GW9 593 aaKnown RBP8.83□□□□□ -1
CSDE1-213ENST00000530784 TFCP2L1Q9NZI6 479 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 LUC7L2Q9Y383 392 aaKnown RBP8.83□□□□□ -1
CSDE1-213ENST00000530784 COL4A3Q01955 1670 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 NSD2O96028 1365 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 USP47Q96K76 1375 aa8.83□□□□□ -1
CSDE1-213ENST00000530784 HSD11B2P80365 405 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 DSC2Q02487 901 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 TLE1Q04724 770 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 RRS1Q15050 365 aaKnown RBP8.82□□□□□ -1
CSDE1-213ENST00000530784 PABPC1LQ4VXU2 614 aaKnown RBP8.82□□□□□ -1
CSDE1-213ENST00000530784 PCSK4Q6UW60 755 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 GADL1Q6ZQY3 521 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 NLGN4YQ8NFZ3 816 aaPredicted RBP8.82□□□□□ -1
CSDE1-213ENST00000530784 NSUN6Q8TEA1 469 aaKnown RBP8.82□□□□□ -1
CSDE1-213ENST00000530784 STAG1Q8WVM7 1258 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 RAPGEF4Q8WZA2 1011 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 CFAP20Q9Y6A4 193 aaKnown RBP8.82□□□□□ -1
CSDE1-213ENST00000530784 QSER1Q2KHR3 1735 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 SHANK3Q9BYB0 1731 aa8.82□□□□□ -1
CSDE1-213ENST00000530784 CGNL1Q0VF96 1302 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 GRID2IPA4D2P6 1211 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 FYB1O15117 783 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 B3GALT2O43825 422 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 GPANK1O95872 356 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 MTHFD1P11586 935 aaKnown RBP8.81□□□□□ -1
CSDE1-213ENST00000530784 NEK2P51955 445 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 IGBP1P78318 339 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 MXRA7P84157 204 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 CPA6Q8N4T0 437 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 NUP133Q8WUM0 1156 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 ALOXE3Q9BYJ1 711 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 CALCOCO1Q9P1Z2 691 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 CCNL1Q9UK58 526 aaPredicted RBP8.81□□□□□ -1
CSDE1-213ENST00000530784 FLT4P35916 1363 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 KIF24Q5T7B8 1368 aa8.81□□□□□ -1
CSDE1-213ENST00000530784 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 LY75O60449 1722 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 CDKL5O76039 1030 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 HAUS5O94927 633 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 RPLP2P05387 115 aaKnown RBP8.8□□□□□ -1
CSDE1-213ENST00000530784 CD1AP06126 327 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 SLFN5Q08AF3 891 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 GPR162Q16538 588 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 SPDYE7PQ495Y7 208 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 KHDC1Q4VXA5 237 aaKnown RBP8.8□□□□□ -1
CSDE1-213ENST00000530784 TMEM240Q5SV17 173 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 TTC7BQ86TV6 843 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 IL17RDQ8NFM7 739 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 ASB10Q8WXI3 467 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 VRK1Q99986 396 aaPredicted RBP8.8□□□□□ -1
CSDE1-213ENST00000530784 DDX56Q9NY93 547 aaKnown RBP8.8□□□□□ -1
CSDE1-213ENST00000530784 HSFX1Q9UBD0 423 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 DMRT1Q9Y5R6 373 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 NOX1Q9Y5S8 564 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 INSRP06213 1382 aa8.8□□□□□ -1
CSDE1-213ENST00000530784 PDCP20941 246 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 CXADRP78310 365 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 FLYWCH1Q4VC44 716 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 HSP90AB2PQ58FF8 381 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 UTP14CQ5TAP6 766 aaKnown RBP8.79□□□□□ -1
CSDE1-213ENST00000530784 ARMC6Q6NXE6 501 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 LCORLQ8N3X6 602 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 BEND2Q8NDZ0 799 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 RNF31Q96EP0 1072 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 CYP4F11Q9HBI6 524 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 TYW1Q9NV66 732 aaKnown RBP8.79□□□□□ -1
CSDE1-213ENST00000530784 RNF181Q9P0P0 153 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
CSDE1-213ENST00000530784 RGPD2P0DJD1 1756 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 PIPSLA2A3N6 862 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 AGFG2O95081 481 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 IL33O95760 270 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 FOSP01100 380 aaPredicted RBP8.78□□□□□ -1
CSDE1-213ENST00000530784 FCER1AP12319 257 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 FOXR2Q6PJQ5 311 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 Q6YL49 198 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 NACC2Q96BF6 587 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 HOOK2Q96ED9 719 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 HSPBAP1Q96EW2 488 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 PNKPQ96T60 521 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 AGAP2Q99490 1192 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 AASDHPPTQ9NRN7 309 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 NSD3Q9BZ95 1437 aa8.78□□□□□ -1
CSDE1-213ENST00000530784 TUBGCP6Q96RT7 1819 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms