RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 EFCAB13Q8IY85 973 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 KRI1Q8N9T8 703 aaKnown RBP16.09■□□□□ 0.17
CAPN1-219ENST00000530495 LARP4BQ92615 738 aaKnown RBP16.09■□□□□ 0.17
CAPN1-219ENST00000530495 STRA6Q9BX79 667 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 ARRDC1-AS1Q9H2J1 176 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 KIF9Q9HAQ2 790 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 TMLHEQ9NVH6 421 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 CACNA1BQ00975 2339 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
CAPN1-219ENST00000530495 ACACBO00763 2458 aa16.08■□□□□ 0.17
CAPN1-219ENST00000530495 EML5Q05BV3 1969 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 ATG2BQ96BY7 2078 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 RPP40O75818 363 aaKnown RBP16.08■□□□□ 0.16
CAPN1-219ENST00000530495 AKAP3O75969 853 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 CSH1P0DML2 217 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 CSH2P0DML3 217 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 PNPLA4P41247 253 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 PXNP49023 591 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-219ENST00000530495 BFSP1Q12934 665 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 ZNF268Q14587 947 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-219ENST00000530495 NFE2Q16621 373 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-219ENST00000530495 TXNDC8Q6A555 127 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 TRIM68Q6AZZ1 485 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 RASSF8Q8NHQ8 419 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 POMGNT1Q8WZA1 660 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 HVCN1Q96D96 273 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 ZC3H10Q96K80 434 aaKnown RBP16.08■□□□□ 0.16
CAPN1-219ENST00000530495 IKZF4Q9H2S9 585 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 FBRSL1Q9HCM7 1045 aaKnown RBP16.08■□□□□ 0.16
CAPN1-219ENST00000530495 SLC8A2Q9UPR5 921 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 SPAG17Q6Q759 2223 aa16.08■□□□□ 0.16
CAPN1-219ENST00000530495 PRPF40AO75400 957 aaKnown RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 PPP1R37O75864 691 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 EPN2O95208 641 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 DRD1P21728 446 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 GALK1P51570 392 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 TSPY1Q01534 308 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 PDGFRLQ15198 375 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 SF3A2Q15428 464 aaKnown RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 AASDHQ4L235 1098 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 PLA2G2CQ5R387 149 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 IL31Q6EBC2 164 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 CC2D1AQ6P1N0 951 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 KBTBD6Q86V97 674 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 RIN3Q8TB24 985 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
CAPN1-219ENST00000530495 MYRFLQ96LU7 910 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 ZNF560Q96MR9 790 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 ACBD6Q9BR61 282 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 ABCB6Q9NP58 842 aa16.07■□□□□ 0.16
CAPN1-219ENST00000530495 EGFP01133 1207 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 ARSAP15289 507 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 GPR15P49685 360 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 RPL10AP62906 217 aaKnown RBP16.06■□□□□ 0.16
CAPN1-219ENST00000530495 SF3A1Q15459 793 aaKnown RBP16.06■□□□□ 0.16
CAPN1-219ENST00000530495 FBXO43Q4G163 708 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 BRAPQ7Z569 592 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 SFR1Q86XK3 245 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 PDCL2Q8N4E4 241 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 C12orf50Q8NA57 414 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-219ENST00000530495 TRMT2BQ96GJ1 504 aaKnown RBP16.06■□□□□ 0.16
CAPN1-219ENST00000530495 PKMYT1Q99640 499 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-219ENST00000530495 SEL1LQ9UBV2 794 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 MAGED2Q9UNF1 606 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-219ENST00000530495 AGAP1Q9UPQ3 857 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 SMC3Q9UQE7 1217 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 PCDHGA5Q9Y5G8 931 aa16.06■□□□□ 0.16
CAPN1-219ENST00000530495 RNF40O75150 1001 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 NOL4O94818 638 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
CAPN1-219ENST00000530495 CYP2F1P24903 491 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 GJA4P35212 333 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 WNT7BP56706 349 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 TFAMQ00059 246 aaKnown RBP16.05■□□□□ 0.16
CAPN1-219ENST00000530495 KCNA1Q09470 495 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 CCDC6Q16204 474 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 DDR2Q16832 855 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 ST3GAL2Q16842 350 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 USP49Q70CQ1 688 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 TMEM86AQ8N2M4 240 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 C1orf127Q8N9H9 656 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 STKLD1Q8NE28 680 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 CXorf38Q8TB03 319 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 CACTINQ8WUQ7 758 aaKnown RBP16.05■□□□□ 0.16
CAPN1-219ENST00000530495 EXOC4Q96A65 974 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 EPSTI1Q96J88 318 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 P2RY13Q9BPV8 354 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 GDAP2Q9NXN4 497 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 DDX43Q9NXZ2 648 aaKnown RBP16.05■□□□□ 0.16
CAPN1-219ENST00000530495 STK17AQ9UEE5 414 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 L1RE1Q9UN81 338 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms