RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SCAF4O95104 1147 aaKnown RBP5.96□□□□□ -1.46
CSDE1-212ENST00000529046 ATP5JP18859 108 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 ZNF280AP59817 542 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-212ENST00000529046 HLTFQ14527 1009 aaKnown RBP eCLIP5.96□□□□□ -1.46
CSDE1-212ENST00000529046 SLC15A2Q16348 729 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 TXNRD1Q16881 649 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 KHDC1Q4VXA5 237 aaKnown RBP5.96□□□□□ -1.46
CSDE1-212ENST00000529046 CRB2Q5IJ48 1285 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 ZNF627Q7L945 461 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 DGKHQ86XP1 1220 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 LDLRAD3Q86YD5 345 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 FAM90A1Q86YD7 464 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 SYT12Q8IV01 421 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 ZBTB34Q8NCN2 500 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 RAB24Q969Q5 203 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 CGRRF1Q99675 332 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 MYOCQ99972 504 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 EIF2B4Q9UI10 523 aaKnown RBP5.96□□□□□ -1.46
CSDE1-212ENST00000529046 STXBP5LQ9Y2K9 1186 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 SBF2Q86WG5 1849 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 MON2Q7Z3U7 1717 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 CGNL1Q0VF96 1302 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 A0A1W2PP64 1363 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 TONSLQ96HA7 1378 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 LRRC14BA6NHZ5 514 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 A6NNZ2 444 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 VSTM5A8MXK1 200 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 F2RL2O00254 374 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 PPFIA4O75335 1185 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 UBXN7O94888 489 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 TYRP14679 529 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 MGAT1P26572 445 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 SLC6A4P31645 630 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 USP14P54578 494 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 PABPC1LQ4VXU2 614 aaKnown RBP5.95□□□□□ -1.46
CSDE1-212ENST00000529046 PTF1AQ7RTS3 328 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 MRGPRGQ86SM5 289 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 MRGPREQ86SM8 312 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.95□□□□□ -1.46
CSDE1-212ENST00000529046 PLBD2Q8NHP8 589 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 ZFP28Q8NHY6 868 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 LENG9Q96B70 501 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 CDK5RAP3Q96JB5 506 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 LRGUKQ96M69 825 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 PRRX2Q99811 253 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 IKZF4Q9H2S9 585 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 MAN1C1Q9NR34 630 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 WNK3Q9BYP7 1800 aa5.95□□□□□ -1.46
CSDE1-212ENST00000529046 KIF24Q5T7B8 1368 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 MAP3K5Q99683 1374 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 A0A087X1B8 175 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 FAM227AF5H4B4 570 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 CTNND1O60716 968 aaKnown RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 SLC43A1O75387 559 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 FTLP02792 175 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 PRDX5P30044 214 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 APOBEC3AP31941 199 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 PURAQ00577 322 aaKnown RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 UBXN2BQ14CS0 331 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 HSP90AB2PQ58FF8 381 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 FAM102AQ5T9C2 384 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 EMC10Q5UCC4 262 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 SLC4A10Q6U841 1118 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 HEATR3Q7Z4Q2 680 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 ULK2Q8IYT8 1036 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 PPP1R35Q8TAP8 253 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 KLHDC4Q8TBB5 520 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 TFAP2CQ92754 450 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 VRK1Q99986 396 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 WDCPQ9H6R7 721 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 FBXO34Q9NWN3 711 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 STK32BQ9NY57 414 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 JKAMPQ9P055 326 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 DDX20Q9UHI6 824 aaKnown RBP5.94□□□□□ -1.46
CSDE1-212ENST00000529046 L1RE1Q9UN81 338 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 FZD1Q9UP38 647 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 CHST2Q9Y4C5 530 aa5.94□□□□□ -1.46
CSDE1-212ENST00000529046 RTL1A6NKG5 1358 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 ANKRD36BQ8N2N9 1353 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 PRSS29PA6NIE9 313 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 DRGXA6NNA5 263 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 GRM6O15303 877 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 ITGB1P05556 798 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 SBK3P0C264 359 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 RAP2AP10114 183 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 MTHFD1P11586 935 aaKnown RBP5.93□□□□□ -1.46
CSDE1-212ENST00000529046 NR4A1P22736 598 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 HTR1BP28222 390 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 GRM3Q14832 879 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 ATP2B3Q16720 1220 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 ANO6Q4KMQ2 910 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 ATXN7L2Q5T6C5 722 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-212ENST00000529046 EFCAB12Q6NXP0 572 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 LRRC55Q6ZSA7 311 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 RHOUQ7L0Q8 258 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 SRGAP1Q7Z6B7 1085 aa5.93□□□□□ -1.46
CSDE1-212ENST00000529046 WDR75Q8IWA0 830 aaKnown RBP5.93□□□□□ -1.46
CSDE1-212ENST00000529046 NLGN4YQ8NFZ3 816 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-212ENST00000529046 OR10H5Q8NGA6 315 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms