RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TRAF3IP3Q9Y228 551 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 SCN1AP35498 2009 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 MYBPHLA2RUH7 354 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 KRBA1A5PL33 1030 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 A8MXQ7 604 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 ECI2O75521 394 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 ATF6P18850 670 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 VIPR2P41587 438 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 VAMP7P51809 220 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 DLG4P78352 724 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 PFKPQ01813 784 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 NCOA4Q13772 614 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
CAPN1-216ENST00000528739 SCARA5Q6ZMJ2 495 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 C4orf50Q6ZRC1 276 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 TMC8Q8IU68 726 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 FAM186BQ8IYM0 893 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 STKLD1Q8NE28 680 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 PLEKHO2Q8TD55 490 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 ELSPBP1Q96BH3 223 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 SHDQ96IW2 340 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 ASB16Q96NS5 453 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 TSG101Q99816 390 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 MRPL45Q9BRJ2 306 aaKnown RBP15.29■□□□□ 0.04
CAPN1-216ENST00000528739 BRD9Q9H8M2 597 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-216ENST00000528739 TECTAO75443 2155 aa15.29■□□□□ 0.04
CAPN1-216ENST00000528739 NRG2O14511 850 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 GABRDO14764 452 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 MOSPD3O75425 235 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 C4BPAP04003 597 aaKnown RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 CSH1P0DML2 217 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 CSH2P0DML3 217 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 P4HA1P13674 534 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 WARSP23381 471 aaKnown RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 CDC25CP30307 473 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 GRIK1P39086 918 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 CLCN5P51795 746 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 EPHA5P54756 1037 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 CYP4F8P98187 520 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 MAPRE1Q15691 268 aaKnown RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 SLC44A4Q53GD3 710 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 TMEM105Q8N8V8 129 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 KBTBD7Q8WVZ9 684 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 EEF2KMTQ96G04 330 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 GSDMAQ96QA5 445 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 TRMT61BQ9BVS5 477 aaKnown RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 KCNH6Q9H252 994 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 TBC1D17Q9HA65 648 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 SLC2A4RGQ9NR83 387 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 ARIH1Q9Y4X5 557 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-216ENST00000528739 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
CAPN1-216ENST00000528739 TCHHQ07283 1943 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 ZNF263O14978 683 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 CETN3O15182 167 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 AKAP3O75969 853 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 BDNFP23560 247 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 ANXA13P27216 316 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 GDI1P31150 447 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 PLA2G5P39877 138 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 RAP1GAPP47736 663 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 STIM1Q13586 685 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 CCDC142Q17RM4 750 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 SGSM1Q2NKQ1 1148 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 MDH1BQ5I0G3 518 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 STXBP5Q5T5C0 1151 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 ZNF658Q5TYW1 1059 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-216ENST00000528739 POTEHQ6S545 545 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 INTS8Q75QN2 995 aaKnown RBP15.27■□□□□ 0.04
CAPN1-216ENST00000528739 GAREM2Q75VX8 874 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 CCDC150Q8NCX0 1101 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 TTC16Q8NEE8 873 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 MYLPFQ96A32 169 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 TIGD1Q96MW7 591 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 MED10Q9BTT4 135 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 LRRC3Q9BY71 257 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 IMPG2Q9BZV3 1241 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 CHMP5Q9NZZ3 219 aa15.27■□□□□ 0.04
CAPN1-216ENST00000528739 DOCK6Q96HP0 2047 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 HEPACAM2A8MVW5 462 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 PI15O43692 258 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 TACC1O75410 805 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 TRIM49P0CI25 452 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 TRIM49CP0CI26 452 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 EPB41P11171 864 aaKnown RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 NPR3P17342 541 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 PSMC3P17980 439 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 PRCPP42785 496 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 GCLMP48507 274 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 PTPN5P54829 565 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 CDH8P55286 799 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 UBXN2BQ14CS0 331 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 MLF2Q15773 248 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms