RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 MYL4P12829 197 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 IL2RBP14784 551 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 GYPEP15421 78 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 TNFAIP3P21580 790 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 APOBEC3AP31941 199 aaPredicted RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 RABGGTBP53611 331 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 ITGA8P53708 1063 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 GNAI1P63096 354 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 DGCR2P98153 550 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 CREMQ03060 361 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 GALNT1Q10472 559 aaPredicted RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 HABP2Q14520 560 aaPredicted RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 POSTNQ15063 836 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 PRKD1Q15139 912 aaPredicted RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 FAM47AQ5JRC9 791 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 UTP14CQ5TAP6 766 aaKnown RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 EMC10Q5UCC4 262 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 FBXO38Q6PIJ6 1188 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 MAMDC4Q6UXC1 1216 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 CATSPERGQ6ZRH7 1159 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 RFX8Q6ZV50 586 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 MED25Q71SY5 747 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 PALM2Q8IXS6 379 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 SDR16C5Q8N3Y7 309 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 FANCBQ8NB91 859 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 CASKIN2Q8WXE0 1202 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 TRIM43Q96BQ3 446 aaPredicted RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 UBXN10Q96LJ8 280 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 PPM1MQ96MI6 270 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 SORBS1Q9BX66 1292 aaKnown RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 C11orf54Q9H0W9 315 aaPredicted RBP3.84□□□□□ -1.79
CD44-229ENST00000528672 DEF6Q9H4E7 631 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 TM7SF3Q9NS93 570 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 PDP2Q9P2J9 529 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 ZDHHC8Q9ULC8 765 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 MED16Q9Y2X0 877 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 A0A1B0GVC2 190 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 RRN3P2A6NIE6 340 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 TBKBP1A7MCY6 615 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 LGALS16A8MUM7 142 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 J3KRW8 73 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 EIF3FO00303 357 aaPredicted RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 PODXLO00592 558 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 AREL1O15033 823 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 NPC1O15118 1278 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 FAM20BO75063 409 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 ERBB2P04626 1255 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 LDHCP07864 332 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 FAM163BP0C2L3 166 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 ATP5JP18859 108 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 SERPINF1P36955 418 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 HHEXQ03014 270 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 KRTAP1-1Q07627 177 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 SLFN5Q08AF3 891 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 FOXO1Q12778 655 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 G3BP1Q13283 466 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD44-229ENST00000528672 RAB32Q13637 225 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 MYBPC2Q14324 1141 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 SPARCL1Q14515 664 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 CDSNQ15517 529 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 TAF5Q15542 800 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 HYIQ5T013 277 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 L1TD1Q5T7N2 865 aaKnown RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 INTS11Q5TA45 600 aaKnown RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 MFSD5Q6N075 450 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 UNC13DQ70J99 1090 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 RSRC2Q7L4I2 434 aaKnown RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 GPRIN1Q7Z2K8 1008 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 GALNT15Q8N3T1 639 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 D2HGDHQ8N465 521 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 CCDC150Q8NCX0 1101 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 IPCEF1Q8WWN9 437 aaPredicted RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 USP13Q92995 863 aaPredicted RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 C18orf8Q96DM3 657 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 MARS2Q96GW9 593 aaKnown RBP3.83□□□□□ -1.8
CD44-229ENST00000528672 KLHL32Q96NJ5 620 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 FAM167BQ9BTA0 163 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 DPH1Q9BZG8 443 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 ZNF518BQ9C0D4 1074 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 SMOC2Q9H3U7 446 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 SMURF2Q9HAU4 748 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 MOCS1Q9NZB8 636 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 HSFX1Q9UBD0 423 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 ITGB1BP2Q9UKP3 347 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 PAXBP1Q9Y5B6 917 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 RPS6KL1Q9Y6S9 549 aa3.83□□□□□ -1.8
CD44-229ENST00000528672 DRGXA6NNA5 263 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 PYCARD-AS1I3L0S3 204 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 SYT5O00445 386 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 ACKR2O00590 384 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 AKAP8O43823 692 aaKnown RBP3.82□□□□□ -1.8
CD44-229ENST00000528672 DNAJB5O75953 348 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 RHOBTB3O94955 611 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 KIF20AO95235 890 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 ABHD16AO95870 558 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 GNAI2P04899 355 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 ELANEP08246 267 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 MTHFD1P11586 935 aaKnown RBP3.82□□□□□ -1.8
CD44-229ENST00000528672 FCER1AP12319 257 aa3.82□□□□□ -1.8
CD44-229ENST00000528672 VEGFAP15692 232 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms