RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 SAE1Q9UBE0 346 aaPredicted RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 NXF1Q9UBU9 619 aaKnown RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 TJP2Q9UDY2 1190 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 SSC5DA1L4H1 1573 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 ZBTB42B2RXF5 422 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 ALOX15BO15296 676 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 ITGAVP06756 1048 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 GJB1P08034 283 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 CD19P15391 556 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 TAC1P20366 129 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 PSMA2P25787 234 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 FOXN2P32314 431 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 PSMC4P43686 418 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 DYNLT1P63172 113 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 HSDL1Q3SXM5 330 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 GALNTL6Q49A17 601 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 PTPN20Q4JDL3 420 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 CGB2Q6NT52 195 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 TBC1D1Q86TI0 1168 aaPredicted RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 TRABD2AQ86V40 505 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 JOSD2Q8TAC2 188 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 PLCD4Q9BRC7 762 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 SPATC1LQ9H0A9 340 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 C10orf88Q9H8K7 445 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 VPS37BQ9H9H4 285 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 PRKAG3Q9UGI9 489 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 CYTH4Q9UIA0 394 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 ARL2BPQ9Y2Y0 163 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
AP002008.3-201ENST00000528614 FAM47DPA6NHR8 397 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 SIGLEC16A6NMB1 481 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 TNNC2P02585 160 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 KRT3P12035 628 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 YWHAEP62258 255 aaKnown RBP11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 PDIA2Q13087 525 aaKnown RBP11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 VGLL4Q14135 290 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 PKN2Q16513 984 aaKnown RBP11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 SMTNL2Q2TAL5 461 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 KCNT1Q5JUK3 1230 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 EEF1DP3Q658K8 133 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 MPZL3Q6UWV2 235 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 TDRPQ86YL5 185 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 ZBED8Q8IZ13 594 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 KIAA0319LQ8IZA0 1049 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 ARFGAP1Q8N6T3 406 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 SLC35B2Q8TB61 432 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 TRAPPC12Q8WVT3 735 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 ANKRD36BP1Q96IX9 119 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 GPR20Q99678 358 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 PTPRHQ9HD43 1115 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 AGTPBP1Q9UPW5 1226 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 PPME1Q9Y570 386 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 LTBP3Q9NS15 1303 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 IGKV6-21A0A0C4DH24 114 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 GOLGA8MH3BSY2 632 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 B4GALT5O43286 388 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 BANF1O75531 89 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 ITGBL1O95965 494 aaPredicted RBP11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 KRT19P08727 400 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 PROZP22891 400 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 IL1R2P27930 398 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 POLR2BP30876 1174 aaKnown RBP11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 CDH8P55286 799 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 IL9RQ01113 521 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 NR1H3Q13133 447 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 TMEM132AQ24JP5 1023 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 ATF7IP2Q5U623 682 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 GADL1Q6ZQY3 521 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 CENPUQ71F23 418 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 TMEM130Q8N3G9 435 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 MRRFQ96E11 262 aaKnown RBP11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 C2orf40Q9H1Z8 148 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 ECT2Q9H8V3 914 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 PCDH9Q9HC56 1237 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 GPRC5DQ9NZD1 345 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 STRIP2Q9ULQ0 834 aa11.06□□□□□ -0.64
AP002008.3-201ENST00000528614 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 INO80B-WBP1J3KQ70 363 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ACKR2O00590 384 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 B4GALT4O60513 344 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 LRCH4O75427 683 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 LGR5O75473 907 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 RDXP35241 583 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 NCALDP61601 193 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 PSMC1P62191 440 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 OTUD4Q01804 1114 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 SLC25A11Q02978 314 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ORC1Q13415 861 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 MTFR1Q15390 333 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 POLNQ7Z5Q5 900 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ANKMY2Q8IV38 441 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 TMEM192Q8IY95 271 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ACTL9Q8TC94 416 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms