RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 GPD1LQ8N335 351 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 CSGALNACT2Q8N6G5 542 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 TOP6BLQ8N6T0 577 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 OR5B17Q8NGF7 314 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 GIPC2Q8TF65 315 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 CHFRQ96EP1 664 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 MSANTD3Q96H12 275 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 MYRFLQ96LU7 910 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 SEPT5Q99719 369 aaPredicted RBP9.15□□□□□ -0.94
CHD7-206ENST00000527900 FAM83CQ9BQN1 747 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 FAM126AQ9BYI3 521 aaPredicted RBP9.15□□□□□ -0.94
CHD7-206ENST00000527900 GZF1Q9H116 711 aaPredicted RBP9.15□□□□□ -0.94
CHD7-206ENST00000527900 EPC1Q9H2F5 836 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 SLITRK6Q9H5Y7 841 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 C8orf33Q9H7E9 229 aaPredicted RBP9.15□□□□□ -0.94
CHD7-206ENST00000527900 ABCB6Q9NP58 842 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 NDRG2Q9UN36 371 aaKnown RBP9.15□□□□□ -0.94
CHD7-206ENST00000527900 PCDHB5Q9Y5E4 795 aa9.15□□□□□ -0.94
CHD7-206ENST00000527900 HCRTO43612 131 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 KINO60870 393 aaKnown RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 TADA3O75528 432 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 NOL4O94818 638 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 PAPSS2O95340 614 aaPredicted RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 TGM1P22735 817 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 CYP2F1P24903 491 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 CTHP32929 405 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 SOX9P48436 509 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 RBP5P82980 135 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 VEPH1Q14D04 833 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 NFE2Q16621 373 aaPredicted RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 CCDC142Q17RM4 750 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 CFAP221Q4G0U5 840 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 ARHGAP29Q52LW3 1261 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 ARHGAP15Q53QZ3 475 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 C1orf228Q6PIY5 440 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 DPH6Q7L8W6 267 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 RALGPS2Q86X27 583 aaPredicted RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 CBWD2Q8IUF1 395 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 CMTM8Q8IZV2 173 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 DCLK2Q8N568 766 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 IQUBQ8NA54 791 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 RIN3Q8TB24 985 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 BPIFB1Q8TDL5 484 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 KCNG4Q8TDN1 519 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 SCFD1Q8WVM8 642 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 KBTBD7Q8WVZ9 684 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 RUBCNQ92622 972 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 TRMT2BQ96GJ1 504 aaKnown RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 ZFYVE19Q96K21 471 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 ZNF396Q96N95 335 aaPredicted RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 MTMR12Q9C0I1 747 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 LRRC27Q9C0I9 530 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 DDX43Q9NXZ2 648 aaKnown RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 ABI2Q9NYB9 513 aaPredicted RBP9.14□□□□□ -0.95
CHD7-206ENST00000527900 GTSE1Q9NYZ3 720 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 ZMYM5Q9UJ78 669 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 GTF3C4Q9UKN8 822 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 SNX9Q9Y5X1 595 aa9.14□□□□□ -0.95
CHD7-206ENST00000527900 OTOL1A6NHN0 477 aaPredicted RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 ZNF233A6NK53 670 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 SLC38A8A6NNN8 435 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 SPECC1L-ADORA2AF8WAN1 911 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 K7ESF4 209 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 HUS1O60921 280 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 CST3P01034 146 aaPredicted RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 CSH1P0DML2 217 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 CSH2P0DML3 217 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 ZSCAN22P10073 491 aaPredicted RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 PDIA4P13667 645 aaKnown RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 ACAT1P24752 427 aaKnown RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 LMO2P25791 158 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 DDX6P26196 483 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHD7-206ENST00000527900 ID4P47928 161 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 LHX1P48742 406 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 SNRPFP62306 86 aaKnown RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 AMPD3Q01432 767 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 TSPY1Q01534 308 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 TNK2Q07912 1038 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 BFSP1Q12934 665 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 CCINQ13939 588 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 SURF1Q15526 300 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 DDR2Q16832 855 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 DUOXA2Q1HG44 320 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 SDHAF4Q5VUM1 108 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 LMBRD2Q68DH5 695 aaPredicted RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 MON1AQ86VX9 555 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 WDR49Q8IV35 697 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 C12orf56Q8IXR9 622 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 YAF2Q8IY57 180 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 SPEM1Q8N4L4 309 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 CELF5Q8N6W0 485 aaKnown RBP9.13□□□□□ -0.95
CHD7-206ENST00000527900 STKLD1Q8NE28 680 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 CSGALNACT1Q8TDX6 532 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 TMEM174Q8WUU8 243 aa9.13□□□□□ -0.95
CHD7-206ENST00000527900 ATRIPQ8WXE1 791 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms