RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 PSMC5P62195 406 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MXRA7P84157 204 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 PTP4A2Q12974 167 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MTM1Q13496 603 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MAP4K3Q8IVH8 894 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 KLF6Q99612 283 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MAK16Q9BXY0 300 aaKnown RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 LRRD1A4D1F6 860 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 CFAP69A5D8W1 941 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ICAM1P05362 532 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 PTPN4P29074 926 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 GTF2H1P32780 548 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 CTCFP49711 727 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 WASHC2DQ5SRD0 308 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MFSD7Q6UXD7 560 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 MON1BQ7L1V2 547 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 ZNF677Q86XU0 584 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 RCOR2Q8IZ40 523 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 DNAJC9Q8WXX5 260 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
CAPN1-208ENST00000527323 PSMC3IPQ9P2W1 217 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-208ENST00000527323 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 E7ENQ6 273 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 HLA-DRAP01903 254 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 GNA15P30679 374 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 CDCA2Q69YH5 1023 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-208ENST00000527323 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
CAPN1-208ENST00000527323 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 ATP4AP20648 1035 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 ADRA1DP25100 572 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 HTRA3P83110 453 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 SLC45A4Q5BKX6 768 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-208ENST00000527323 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-208ENST00000527323 PYROXD1Q8WU10 500 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
CAPN1-208ENST00000527323 TMEM121Q9BTD3 319 aa13.15□□□□□ -0.3
CAPN1-208ENST00000527323 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-208ENST00000527323 A6NHS1 94 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SMIM24O75264 130 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 TCF4P15884 667 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ATP6V1C1P21283 382 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 RPL7AP62424 266 aaKnown RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 MAPK6Q16659 721 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 USP50Q70EL3 339 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 BSNDQ8WZ55 320 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ZIC5Q96T25 663 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SENP7Q9BQF6 1050 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ASCC2Q9H1I8 757 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 DCLRE1BQ9H816 532 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ANKFY1Q9P2R3 1169 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SCINQ9Y6U3 715 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ALOX15BO15296 676 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SSTR1P30872 391 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 GEMIN4P57678 1058 aaKnown RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 DYNLT1P63172 113 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 RGS9BPQ6ZS82 235 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ABRAQ8N0Z2 381 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 LPAR1Q92633 364 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 PARVAQ9NVD7 372 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 IP6K2Q9UHH9 426 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 LYPLA2O95372 231 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ACOT2P49753 483 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 MORF4L2Q15014 288 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 KHDC1Q4VXA5 237 aaKnown RBP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 RFWD3Q6PCD5 774 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ALLCQ8N6M5 410 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 MCUR1Q96AQ8 359 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 STOML1Q9UBI4 398 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms