RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SMYD5Q6GMV2 418 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 ANKRD13AQ8IZ07 590 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 CCDC197Q8NCU1 140 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 NKD2Q969F2 451 aaPredicted RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 TWNKQ96RR1 684 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 FOXP3Q9BZS1 431 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 RPF1Q9H9Y2 349 aaKnown RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 HMGXB4Q9UGU5 601 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 CSDE1O75534 798 aaKnown RBP18.53■□□□□ 0.56
USH1C-205ENST00000527020 IL18RAPO95256 599 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 KRT19P08727 400 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 CD19P15391 556 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 IL1R2P27930 398 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 ATP5DP30049 168 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 PSMC4P43686 418 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 ARSEP51690 589 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 AMHR2Q16671 573 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 POLNQ7Z5Q5 900 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 CCHCR1Q8TD31 782 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 CPXM1Q96SM3 734 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 NFKBIZQ9BYH8 718 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 SMYD3Q9H7B4 428 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 STRIP2Q9ULQ0 834 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 NAALADL1Q9UQQ1 740 aa18.53■□□□□ 0.56
USH1C-205ENST00000527020 LACTBL1A8MY62 500 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 LRCH4O75427 683 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 ITGAVP06756 1048 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 ABHD2P08910 425 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 PSMA2P25787 234 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 TMEM132AQ24JP5 1023 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 ZNF667Q5HYK9 610 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 SLC4A11Q8NBS3 891 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 SLC35B2Q8TB61 432 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 MGARPQ8TDB4 240 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 GOLGA6L7A0A1B0GV03 622 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 VIMP08670 466 aaKnown RBP18.52■□□□□ 0.56
USH1C-205ENST00000527020 KRT3P12035 628 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 PECAM1P16284 738 aaPredicted RBP18.52■□□□□ 0.56
USH1C-205ENST00000527020 GCAP28676 217 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 SF3A3Q12874 501 aaKnown RBP eCLIP18.52■□□□□ 0.56
USH1C-205ENST00000527020 GPS1Q13098 491 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 PPIL2Q13356 520 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 STAT4Q14765 748 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 FASTKD3Q14CZ7 662 aaKnown RBP18.52■□□□□ 0.56
USH1C-205ENST00000527020 JADE1Q6IE81 842 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 XYLT1Q86Y38 959 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 TMEM121Q9BTD3 319 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 ELOVL4Q9GZR5 314 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 ACTR5Q9H9F9 607 aaPredicted RBP18.52■□□□□ 0.56
USH1C-205ENST00000527020 SAYSD1Q9NPB0 183 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 TBK1Q9UHD2 729 aa18.52■□□□□ 0.56
USH1C-205ENST00000527020 CDH16O75309 829 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 GH1P01241 217 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 ERBB2P04626 1255 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 STAG3L1P0CL83 205 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 HNRNPH1P31943 449 aaKnown RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 GSCP56915 257 aaPredicted RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 IGBP1P78318 339 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 ARHGAP1Q07960 439 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 ITIH4Q14624 930 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 FAM187BQ17R55 369 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 SMTNL2Q2TAL5 461 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 GJC2Q5T442 439 aaPredicted RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 RNASEH2BQ5TBB1 312 aaKnown RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 LINC01465Q8N7H1 131 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 CDCA5Q96FF9 252 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 ELAC2Q9BQ52 826 aaKnown RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 KDM4CQ9H3R0 1056 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 TPX2Q9ULW0 747 aaKnown RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 CITO14578 2027 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 TRIP11Q15643 1979 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 CCT8L1PA6NM43 557 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 MED7O43513 233 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 ITGB3P05106 788 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 BRAFP15056 766 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 PSMC1P62191 440 aaKnown RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 TTLL4Q14679 1199 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 TAZQ16635 292 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 WDR78Q5VTH9 848 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 EMC1Q8N766 993 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 MAML1Q92585 1016 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 P3H4Q92791 437 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 MROH8Q9H579 483 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 PDZD7Q9H5P4 517 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 ZWILCHQ9H900 591 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 MLXIPLQ9NP71 852 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 PRMT7Q9NVM4 692 aaPredicted RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 ERAP1Q9NZ08 941 aa18.51■□□□□ 0.55
USH1C-205ENST00000527020 SAE1Q9UBE0 346 aaPredicted RBP18.51■□□□□ 0.55
USH1C-205ENST00000527020 OAS1P00973 400 aaKnown RBP18.5■□□□□ 0.55
USH1C-205ENST00000527020 INSRRP14616 1297 aa18.5■□□□□ 0.55
USH1C-205ENST00000527020 POLR2BP30876 1174 aaKnown RBP18.5■□□□□ 0.55
USH1C-205ENST00000527020 SCTRP47872 440 aa18.5■□□□□ 0.55
USH1C-205ENST00000527020 KCNT1Q5JUK3 1230 aa18.5■□□□□ 0.55
USH1C-205ENST00000527020 ANKRD42Q8N9B4 389 aa18.5■□□□□ 0.55
USH1C-205ENST00000527020 OPTNQ96CV9 577 aa18.5■□□□□ 0.55
USH1C-205ENST00000527020 PPP1R16BQ96T49 567 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms