RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 EDRF1Q3B7T1 1238 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 ARHGAP15Q53QZ3 475 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 FAM78AQ5JUQ0 283 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 ZNF658Q5TYW1 1059 aaPredicted RBP18.75■□□□□ 0.59
NR1H3-228ENST00000525441 TDRD10Q5VZ19 366 aaKnown RBP18.75■□□□□ 0.59
NR1H3-228ENST00000525441 ASTLQ6HA08 431 aaPredicted RBP18.75■□□□□ 0.59
NR1H3-228ENST00000525441 C4orf50Q6ZRC1 276 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 INTS8Q75QN2 995 aaKnown RBP18.75■□□□□ 0.59
NR1H3-228ENST00000525441 GPR152Q8TDT2 470 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 SMARCD2Q92925 531 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 FUBP3Q96I24 572 aaKnown RBP eCLIP18.75■□□□□ 0.59
NR1H3-228ENST00000525441 ASB16Q96NS5 453 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 PKMYT1Q99640 499 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 VRTNQ9H8Y1 702 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 NXF1Q9UBU9 619 aaKnown RBP18.75■□□□□ 0.59
NR1H3-228ENST00000525441 PCDHA5Q9Y5H7 936 aa18.75■□□□□ 0.59
NR1H3-228ENST00000525441 MUC6Q6W4X9 2439 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 C4BPAP04003 597 aaKnown RBP18.74■□□□□ 0.59
NR1H3-228ENST00000525441 GJA1P17302 382 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 GABRR2P28476 465 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 CDC25CP30307 473 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 GNL1P36915 607 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-228ENST00000525441 CLCN5P51795 746 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 VAMP7P51809 220 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 NUBP1P53384 320 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 VCPP55072 806 aaKnown RBP18.74■□□□□ 0.59
NR1H3-228ENST00000525441 GPC5P78333 572 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 ENPEPQ07075 957 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 CFAP221Q4G0U5 840 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 COBLL1Q53SF7 1204 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 ZNF667Q5HYK9 610 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 FAM171BQ6P995 826 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 FAM186BQ8IYM0 893 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 SMYD4Q8IYR2 804 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-228ENST00000525441 FLCNQ8NFG4 579 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 OR6B3Q8NGW1 331 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 SPATA20Q8TB22 786 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 GIPC2Q8TF65 315 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 E2F7Q96AV8 911 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 TSG101Q99816 390 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 XYLT2Q9H1B5 865 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 ZNF334Q9HCZ1 680 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-228ENST00000525441 CA14Q9ULX7 337 aa18.74■□□□□ 0.59
NR1H3-228ENST00000525441 MYBPHLA2RUH7 354 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 CETN3O15182 167 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 AKAP3O75969 853 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 PDGFRBP09619 1106 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 CSH1P0DML2 217 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 CSH2P0DML3 217 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 P4HA1P13674 534 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 LMO2P25791 158 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 DLG4P78352 724 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 SGSM1Q2NKQ1 1148 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 ZACNQ401N2 412 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 ZCWPW2Q504Y3 356 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 TANGO2Q6ICL3 276 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 ZSCAN18Q8TBC5 510 aaPredicted RBP18.73■□□□□ 0.59
NR1H3-228ENST00000525441 TAF4BQ92750 862 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 SHDQ96IW2 340 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 ZSWIM3Q96MP5 696 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 MRPL45Q9BRJ2 306 aaKnown RBP18.73■□□□□ 0.59
NR1H3-228ENST00000525441 MKNK1Q9BUB5 465 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 TRPV4Q9HBA0 871 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 ARHGEF3Q9NR81 526 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 MAGEC2Q9UBF1 373 aaPredicted RBP18.73■□□□□ 0.59
NR1H3-228ENST00000525441 ZMYM5Q9UJ78 669 aa18.73■□□□□ 0.59
NR1H3-228ENST00000525441 STK25O00506 426 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 HCRTO43612 131 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 FCARP24071 287 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 CYP2F1P24903 491 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 PRCPP42785 496 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 MAGEA11P43364 429 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 PSMC1P62191 440 aaKnown RBP18.72■□□□□ 0.59
NR1H3-228ENST00000525441 STIM1Q13586 685 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 POTEHQ6S545 545 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 GAREM2Q75VX8 874 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 SV2AQ7L0J3 742 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 MYLPFQ96A32 169 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 FAM122AQ96E09 287 aa18.72■□□□□ 0.59
NR1H3-228ENST00000525441 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
NR1H3-228ENST00000525441 KRBA1A5PL33 1030 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 A8MXQ7 604 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 NRG2O14511 850 aaPredicted RBP18.71■□□□□ 0.59
NR1H3-228ENST00000525441 ATP2C2O75185 946 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 VNN1O95497 513 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 EPB41P11171 864 aaKnown RBP18.71■□□□□ 0.59
NR1H3-228ENST00000525441 PPP1R2P41236 205 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 PIK3CAP42336 1068 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 GPR158Q5T848 1215 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 VSTM1Q6UX27 236 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 SCN4BQ8IWT1 228 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 MYCBPAPQ8TBZ2 947 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 DEPDC1BQ8WUY9 529 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 TRMT61BQ9BVS5 477 aaKnown RBP18.71■□□□□ 0.59
NR1H3-228ENST00000525441 PLA2G2FQ9BZM2 168 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 TASP1Q9H6P5 420 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 CRTAC1Q9NQ79 661 aa18.71■□□□□ 0.59
NR1H3-228ENST00000525441 UXTQ9UBK9 157 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms