RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SPSB4Q96A44 273 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 UBXN10Q96LJ8 280 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 TBATAQ96M53 351 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 TEPSINQ96N21 525 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 DDX23Q9BUQ8 820 aaKnown RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 DACT1Q9NYF0 836 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 GGA3Q9NZ52 723 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 HSFX1Q9UBD0 423 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 SRP68Q9UHB9 627 aaKnown RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 LRRFIP2Q9Y608 721 aaKnown RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 GRXCR1A8MXD5 290 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 M0QYG6 137 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 TRIM38O00635 465 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 NCAM2O15394 837 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 PRICKLE3O43900 615 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 TNFRSF6BO95407 300 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ARP10275 920 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ALAS1P13196 640 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ACVR2AP27037 513 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF134P52741 427 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 CHN2P52757 468 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 KIAA2012Q0VF49 1180 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 BIRC3Q13489 604 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 MAPKAPK3Q16644 382 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 AGAP9Q5VTM2 703 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 DBX2Q6ZNG2 339 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 LRRC55Q6ZSA7 311 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 Q6ZSN1 163 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 KCTD20Q7Z5Y7 419 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 MOGAT3Q86VF5 341 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ELOA2Q8IYF1 753 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 FITM2Q8N6M3 262 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM46DQ8NEK8 389 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 TBC1D15Q8TC07 691 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 TFAP2CQ92754 450 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 MUL1Q969V5 352 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 KATNAL1Q9BW62 490 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 STK31Q9BXU1 1019 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 MS4A7Q9GZW8 240 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 MLXIPQ9HAP2 919 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 TBC1D23Q9NUY8 699 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 PLA2G3Q9NZ20 509 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF212Q9UDV6 495 aa4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZMYND8Q9ULU4 1186 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P28-201ENST00000521340 A0A0B4J269 797 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 LOC102723971A0A1B0GUV8 181 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 LEFTY2O00292 366 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 PODXLO00592 558 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 PCDH17O14917 1159 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 PIP5K1BO14986 540 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 CCP110O43303 1012 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 EIF5BO60841 1220 aaKnown RBP4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZFPL1O95159 310 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 NTSR2O95665 410 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 AGR2O95994 175 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ITGB1P05556 798 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 PYGLP06737 847 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ELANEP08246 267 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM163BP0C2L3 166 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 MAPRE1Q15691 268 aaKnown RBP4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 SLC5A9Q2M3M2 681 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 TRIM71Q2Q1W2 868 aaKnown RBP4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF750Q32MQ0 723 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 PLA1AQ53H76 456 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 MANEALQ5VSG8 457 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 USP17L6PQ6QN14 398 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 CRTC1Q6UUV9 634 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 MED25Q71SY5 747 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZFP28Q8NHY6 868 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 SPPL3Q8TCT6 385 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ST8SIA2Q92186 375 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 LRRC46Q96FV0 321 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 MARS2Q96GW9 593 aaKnown RBP4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 SNX27Q96L92 541 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 LMF1Q96S06 567 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 MAGEB5Q9BZ81 275 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 IMPG2Q9BZV3 1241 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 SMOC2Q9H3U7 446 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 USP40Q9NVE5 1235 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 PPP4R1LQ9P1A2 415 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 VPS51Q9UID3 782 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ITGB1BP2Q9UKP3 347 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 MAGED2Q9UNF1 606 aaPredicted RBP4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 SLC30A1Q9Y6M5 507 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 NISCHQ9Y2I1 1504 aa4.09□□□□□ -1.75
HMGN1P28-201ENST00000521340 ADM5C9JUS6 153 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 H7C4K7 107 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 FOXS1O43638 330 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 RRP9O43818 475 aaKnown RBP4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CDC14BO60729 498 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CBFA2T3O75081 653 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 SUN1O94901 812 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 GNAI2P04899 355 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CYP2C9P11712 490 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 KCNA3P22001 575 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 MST1P26927 711 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 KCNC1P48547 511 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CPT1AP50416 773 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms