RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GNGT1P63211 74 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 UBXN2AP68543 259 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 DLG4P78352 724 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 MRPS25P82663 173 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 FMO1Q01740 532 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 CDR2Q01850 454 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 ZNF844Q08AG5 666 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PTP4A2Q12974 167 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 MTMR1Q13613 665 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 SIX1Q15475 284 aaPredicted RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 TRADDQ15628 312 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PTGISQ16647 500 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 KRT39Q6A163 491 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 CIAPIN1Q6FI81 312 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 CDPF1Q6NVV7 123 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PPP1R2P3Q6NXS1 205 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 B4GALNT4Q76KP1 1039 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 CYFIP1Q7L576 1253 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 ARMC9Q7Z3E5 817 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 USP37Q86T82 979 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 MYPNQ86TC9 1320 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 NLRX1Q86UT6 975 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 VSIG10LQ86VR7 867 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PALB2Q86YC2 1186 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 KSR1Q8IVT5 923 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 SUGP1Q8IWZ8 645 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 KLHL7Q8IXQ5 586 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 NIM1KQ8IY84 436 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 SYCP3Q8IZU3 236 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 UBL4BQ8N7F7 174 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 MCPH1Q8NEM0 835 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PARD3BQ8TEW8 1205 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PPM1EQ8WY54 764 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 IFT81Q8WYA0 676 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 ALG3Q92685 438 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 CCDC97Q96F63 343 aaPredicted RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 CDHR1Q96JP9 859 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 KREMEN1Q96MU8 473 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PCDHB18PQ96TA0 734 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 MOV10L1Q9BXT6 1211 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 TMPRSS13Q9BYE2 586 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 ZNF341Q9BYN7 854 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 DDX47Q9H0S4 455 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 THAP2Q9H0W7 228 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 EPN3Q9H201 632 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 EPB41L4BQ9H329 900 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 LRRC19Q9H756 370 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 KIAA1586Q9HCI6 787 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 MYOZ2Q9NPC6 264 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 UBE2TQ9NPD8 197 aaPredicted RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 LATS2Q9NRM7 1088 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 LTBP3Q9NS15 1303 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 TAS2R14Q9NYV8 317 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 ARHGAP28Q9P2N2 729 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 PARP2Q9UGN5 583 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 LCMT1Q9UIC8 334 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 CNOT7Q9UIV1 285 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 RASAL2Q9UJF2 1139 aa5.4□□□□□ -1.55
SDC2-204ENST00000519914 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 UTP11Q9Y3A2 253 aaKnown RBP5.4□□□□□ -1.55
SDC2-204ENST00000519914 DICER1Q9UPY3 1922 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 LOC102724159A0A0B4J2E5 919 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 METTL12A8MUP2 240 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 VWA5AO00534 786 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 EBAG9O00559 213 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 TTI1O43156 1089 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 DAPK3O43293 454 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 TNFRSF21O75509 655 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 FAM107AO95990 144 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 KRT14P02533 472 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 FTLP02792 175 aaPredicted RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 CYP1A1P04798 512 aaPredicted RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 MYZAPP0CAP1 466 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 MYBL1P10243 752 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 KCNA2P16389 499 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 CCND2P30279 289 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 SLC1A1P43005 524 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 NPTX2P47972 431 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 GCLMP48507 274 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 GUCY2FP51841 1108 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 GSCP56915 257 aaPredicted RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 CXCL9Q07325 125 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 CYP24A1Q07973 514 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 DMP1Q13316 513 aaPredicted RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 DRP2Q13474 957 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 PRPF4BQ13523 1007 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 PWP2Q15269 919 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 ENOX2Q16206 610 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 SNRNP35Q16560 246 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 UGCGQ16739 394 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 EXOSC6Q5RKV6 272 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 NOL9Q5SY16 702 aaKnown RBP5.39□□□□□ -1.55
SDC2-204ENST00000519914 ACAD10Q6JQN1 1059 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 SLC39A4Q6P5W5 647 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 PAOXQ6QHF9 649 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 C6orf89Q6UWU4 347 aa5.39□□□□□ -1.55
SDC2-204ENST00000519914 ZDHHC24Q6UX98 284 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms