RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	LRRC3	Q9BY71	257 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	UXT	Q9UBK9	157 aa	Predicted RBP	25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	GTF3C4	Q9UKN8	822 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	NOTCH4	Q99466	2003 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	LRRIQ3	A6PVS8	624 aa	Predicted RBP	25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	CST3	P01034	146 aa	Predicted RBP	25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	ATF6	P18850	670 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	GABRR2	P28476	465 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	GNL1	P36915	607 aa	Predicted RBP	25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	PRKCQ	Q04759	706 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	ENPEP	Q07075	957 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	SNW1	Q13573	536 aa	Known RBP	25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	DNASE1L2	Q92874	299 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	LPIN3	Q9BQK8	851 aa		25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	MAGEC2	Q9UBF1	373 aa	Predicted RBP	25.87	■■□□□ 1.73
CNOT7-204	ENST00000518885	KIN	O60870	393 aa	Known RBP	25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	MOSPD3	O75425	235 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	TRIM21	P19474	475 aa	Known RBP	25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	PSMC2	P35998	433 aa	Known RBP	25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	PNOC	Q13519	176 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	NCOA4	Q13772	614 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZNF699	Q32M78	642 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	TANGO2	Q6ICL3	276 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	ST13P5	Q8NFI4	369 aa	Predicted RBP	25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	KBTBD7	Q8WVZ9	684 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZNF516	Q92618	1163 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	TAF4B	Q92750	862 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	SMARCE1	Q969G3	411 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	CEP295NL	Q96MC4	621 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	TRMT61B	Q9BVS5	477 aa	Known RBP	25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	VRTN	Q9H8Y1	702 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	TBC1D17	Q9HA65	648 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	MAPK8IP1	Q9UQF2	711 aa		25.86	■■□□□ 1.73
CNOT7-204	ENST00000518885	DOCK6	Q96HP0	2047 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	KRBA1	A5PL33	1030 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	DPYSL4	O14531	572 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	GALR2	O43603	387 aa	Predicted RBP	25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	GJA1	P17302	382 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	PSMC3	P17980	439 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	DDX6	P26196	483 aa	Known RBP eCLIP	25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	MAGEA11	P43364	429 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	CASP4	P49662	377 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	MYL6	P60660	151 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	ADAM9	Q13443	819 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	SGSM1	Q2NKQ1	1148 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	EDRF1	Q3B7T1	1238 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZNF667	Q5HYK9	610 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	TDRD10	Q5VZ19	366 aa	Known RBP	25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	FAM171B	Q6P995	826 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	VSTM1	Q6UX27	236 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	OSTM1	Q86WC4	334 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	YAF2	Q8IY57	180 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	TMEM105	Q8N8V8	129 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	ENGASE	Q8NFI3	743 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	OR6B3	Q8NGW1	331 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	GIPC2	Q8TF65	315 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	IRF7	Q92985	503 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	TSG101	Q99816	390 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	IMPG2	Q9BZV3	1241 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	BRD9	Q9H8M2	597 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	TMLHE	Q9NVH6	421 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	EHD2	Q9NZN4	543 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	NXF1	Q9UBU9	619 aa	Known RBP	25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZNF318	Q5VUA4	2279 aa		25.85	■■□□□ 1.73
CNOT7-204	ENST00000518885	SOBP	A7XYQ1	873 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	NPR3	P17342	541 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	FCAR	P24071	287 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	VAMP7	P51809	220 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	STIM1	Q13586	685 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	MLF2	Q15773	248 aa	Predicted RBP	25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	SLC44A4	Q53GD3	710 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	GPR158	Q5T848	1215 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	IER5L	Q5T953	404 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZNF658	Q5TYW1	1059 aa	Predicted RBP	25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	CWF19L1	Q69YN2	538 aa	Known RBP	25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	ELOA2	Q8IYF1	753 aa	Predicted RBP	25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	FAM186B	Q8IYM0	893 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	KMT2E	Q8IZD2	1858 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	PKMYT1	Q99640	499 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	GZF1	Q9H116	711 aa	Predicted RBP	25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZDBF2	Q9HCK1	2354 aa		25.84	■■□□□ 1.73
CNOT7-204	ENST00000518885	C4BPA	P04003	597 aa	Known RBP	25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	CYP2F1	P24903	491 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	ANXA13	P27216	316 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	WEE1	P30291	646 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	PPP1R2	P41236	205 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	STARD6	P59095	220 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	COBLL1	Q53SF7	1204 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	SCARA3	Q6AZY7	606 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	GAREM2	Q75VX8	874 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	MFSD6L	Q8IWD5	586 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	CCDC150	Q8NCX0	1101 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	MYCBPAP	Q8TBZ2	947 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZSWIM3	Q96MP5	696 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	DNAI2	Q9GZS0	605 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	XYLT2	Q9H1B5	865 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	TASP1	Q9H6P5	420 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZNF334	Q9HCZ1	680 aa	Predicted RBP	25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	SIT1	Q9Y3P8	196 aa		25.83	■■□□□ 1.73
CNOT7-204	ENST00000518885	MYBPHL	A2RUH7	354 aa		25.82	■■□□□ 1.72

Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms