RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 SFMBT2Q5VUG0 894 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 ARHGAP17Q68EM7 881 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 CEP57Q86XR8 500 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNF677Q86XU0 584 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 MRPL43Q8N983 215 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 B3GALNT2Q8NCR0 500 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 OR10T2Q8NGX3 314 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 C2orf15Q8WU43 125 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 PANX2Q96RD6 677 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 SYT15Q9BQS2 421 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 CLSTN3Q9BQT9 956 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 ALG13Q9NP73 1137 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 HSFX1Q9UBD0 423 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 BZW2Q9Y6E2 419 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 UNC80Q8N2C7 3258 aa12.75□□□□□ -0.37
PDLIM5-220ENST00000514830 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 MYO9BQ13459 2157 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 CYP26A1O43174 497 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 LPXNO60711 386 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 KRT5P13647 590 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 PTPN1P18031 435 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 POU3F3P20264 500 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 ANXA13P27216 316 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 NDUFV1P49821 464 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 ERVFC1P60507 584 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 GPR17Q13304 367 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 RAB33AQ14088 237 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 TPGS2Q68CL5 300 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 TMC7Q7Z402 723 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 MYCBPAPQ8TBZ2 947 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 EPS8L1Q8TE68 723 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 B3GALT6Q96L58 329 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 GAS2L1Q99501 681 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 HNRNPABQ99729 332 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 TCF25Q9BQ70 676 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 SYT11Q9BT88 431 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 ABHD10Q9NUJ1 306 aa12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 NOCTQ9UK39 431 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-220ENST00000514830 GREB1Q4ZG55 1949 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 C2orf71A6NGG8 1288 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 MED7O43513 233 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 GFPT2O94808 682 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 ABLIM3O94929 683 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 CXCL14O95715 111 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 PDGFRBP09619 1106 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 CYP11B1P15538 503 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 CNGA2Q16280 664 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 ASIC2Q16515 512 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 SGO2Q562F6 1265 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 E4F1Q66K89 784 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 WDR59Q6PJI9 974 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 PRSS55Q6UWB4 352 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 LCLAT1Q6UWP7 414 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 RSPO2Q6UXX9 243 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 RTL10Q7L3V2 364 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 ACOT1Q86TX2 421 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNF461Q8TAF7 563 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 ARNTL2Q8WYA1 636 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 DDX1Q92499 740 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 MRPL38Q96DV4 380 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 PPP1R9BQ96SB3 815 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 EMILIN2Q9BXX0 1053 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
PDLIM5-220ENST00000514830 SSU72P8A0A1W2PR75 194 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 MYBPHLA2RUH7 354 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 O00370 1275 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 TEX28O15482 410 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 HCRTO43612 131 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 SERPING1P05155 500 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ADH1AP07327 375 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 CNPP09543 421 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 PNMA6AP0CW24 399 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 GNA15P30679 374 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 USP8P40818 1118 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 MAGEA11P43364 429 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 PDE6CP51160 858 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ROR1Q01973 937 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 PTPROQ16827 1216 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNF394Q53GI3 561 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 LILRA6Q6PI73 481 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms