RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 AP3D1O14617 1153 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 OPLAHO14841 1288 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 STX10O60499 249 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ADAM23O75077 832 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CFBP00751 764 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ITGA2BP08514 1039 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 GSTM1P09488 218 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 RFC5P40937 340 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 AK2P54819 239 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ADARP55265 1226 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 C1QTNF8P60827 252 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 EEF1A1P68104 462 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CAP1Q01518 475 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 EEF1A2Q05639 463 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 IFFO1Q0D2I5 559 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CDC20Q12834 499 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 LRMPQ12912 555 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 DIXDC1Q155Q3 683 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 EEF1A1P5Q5VTE0 462 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SNRNP48Q6IEG0 339 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 KDM7AQ6ZMT4 941 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 FBXL16Q8N461 479 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 TEX47Q8TBZ9 253 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SH3RF3Q8TEJ3 882 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ASZ1Q8WWH4 475 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SYN2Q92777 582 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 LENG1Q96BZ8 264 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 IFT43Q96FT9 208 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CEP170P1Q96L14 293 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 ACAT2Q9BWD1 397 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CRNKL1Q9BZJ0 848 aaKnown RBP7.59□□□□□ -1.19
NIPBL-208ENST00000514335 NOD2Q9HC29 1040 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 AGPAT3Q9NRZ7 376 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 STON1Q9Y6Q2 735 aa7.59□□□□□ -1.19
NIPBL-208ENST00000514335 RGSL1A5PLK6 1076 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 TMEM114B3SHH9 223 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 H3BRJ5 948 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 H7C0C1 242 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 TRIM77I1YAP6 450 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 PHACTR2O75167 634 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ACAA1P09110 424 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 LRPAP1P30533 357 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 GDI2P50395 445 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ALDH18A1P54886 795 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 DSC2Q02487 901 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 MTMR1Q13613 665 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 DMC1Q14565 340 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 HADHQ16836 314 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 EAPPQ56P03 285 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF658Q5TYW1 1059 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 FAM205BPQ63HN1 556 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ITPRIPL1Q6GPH6 555 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ELMSAN1Q6PJG2 1045 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 LZTR1Q8N653 840 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 C10orf53Q8N6V4 93 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 MAGEB6Q8N7X4 407 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 GRK7Q8WTQ7 553 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 SLC22A18Q96BI1 424 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 VPS39Q96JC1 886 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 CAMK1GQ96NX5 476 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 MRPL1Q9BYD6 325 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 TUFT1Q9NNX1 390 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 TBCCD1Q9NVR7 557 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 IFT80Q9P2H3 777 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 MBD2Q9UBB5 411 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 CYTH4Q9UIA0 394 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 POLHQ9Y253 713 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 NCF1BA6NI72 391 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 NCF1CA8MVU1 366 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 MEN1O00255 615 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 AXIN1O15169 862 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 SHOXO15266 292 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 DAB1O75553 588 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 BAG2O95816 211 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 CLTBP09497 229 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 CD46P15529 392 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 STMN1P16949 149 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 MX2P20592 715 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 RELAQ04206 551 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 IKBKEQ14164 716 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 UGP2Q16851 508 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 CCDC58Q4VC31 144 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 XKR3Q5GH77 459 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 DCAF17Q5H9S7 520 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 KDELC2Q7Z4H8 507 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ALLCQ8N6M5 410 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 CAGE1Q8TC20 777 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 AGAP11Q8TF27 550 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 TSPEARQ8WU66 669 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 HAUS1Q96CS2 278 aa7.58□□□□□ -1.2
NIPBL-208ENST00000514335 RPRD1AQ96P16 312 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 PURBQ96QR8 312 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ELAC2Q9BQ52 826 aaKnown RBP7.58□□□□□ -1.2
NIPBL-208ENST00000514335 ISCA1Q9BUE6 129 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms