RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SPPL2BQ8TCT7 592 aa12.92□□□□□ -0.34
CDK7-208ENST00000512687 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
CDK7-208ENST00000512687 KBTBD7Q8WVZ9 684 aa12.92□□□□□ -0.34
CDK7-208ENST00000512687 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
CDK7-208ENST00000512687 PI4K2AQ9BTU6 479 aa12.92□□□□□ -0.34
CDK7-208ENST00000512687 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
CDK7-208ENST00000512687 ASB3Q9Y575 518 aa12.92□□□□□ -0.34
CDK7-208ENST00000512687 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 GABRDO14764 452 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 HUS1O60921 280 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 TNNC2P02585 160 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 C7P10643 843 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 CMA1P23946 247 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 TARSP26639 723 aaKnown RBP12.91□□□□□ -0.34
CDK7-208ENST00000512687 NBL1P41271 181 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 TUFMP49411 452 aaKnown RBP12.91□□□□□ -0.34
CDK7-208ENST00000512687 NDUFA8P51970 172 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 KRT85P78386 507 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 PFKPQ01813 784 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 PRKCQQ04759 706 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 STK4Q13043 487 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 UBXN2BQ14CS0 331 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 PSMD6Q15008 389 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 KMT5BQ4FZB7 885 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 TRAPPC11Q7Z392 1133 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 FRMD5Q7Z6J6 570 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 C12orf56Q8IXR9 622 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
CDK7-208ENST00000512687 TMEM86AQ8N2M4 240 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 TOP6BLQ8N6T0 577 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 FAM200AQ8TCP9 573 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 C2orf15Q8WU43 125 aaKnown RBP12.91□□□□□ -0.34
CDK7-208ENST00000512687 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 DNASE1L2Q92874 299 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 HPDLQ96IR7 371 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 LRRC3BQ96PB8 259 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 ACBD6Q9BR61 282 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 IRF2BPLQ9H1B7 796 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 SLITRK6Q9H5Y7 841 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 LTB4R2Q9NPC1 389 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 NME7Q9Y5B8 376 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 PCDHB5Q9Y5E4 795 aa12.91□□□□□ -0.34
CDK7-208ENST00000512687 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 PROB1E7EW31 1015 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 ARNTLO00327 626 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 ATP2C2O75185 946 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 PRAMEF12O95522 483 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 HMGA1P17096 107 aaKnown RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 PSMC3P17980 439 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 CYP2F1P24903 491 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 GDI1P31150 447 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 CASP4P49662 377 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 TSPY1Q01534 308 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 SURF1Q15526 300 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 KNOP1Q1ED39 458 aaKnown RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 DUOXA2Q1HG44 320 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 GPR158Q5T848 1215 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 ASCL5Q7RTU5 278 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 ITIH5Q86UX2 942 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 ARID3BQ8IVW6 561 aaPredicted RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 MAML2Q8IZL2 1156 aaPredicted RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 ZNF687Q8N1G0 1237 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 KCNV2Q8TDN2 545 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 DEPDC1BQ8WUY9 529 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 SHDQ96IW2 340 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 TRMT61BQ9BVS5 477 aaKnown RBP12.9□□□□□ -0.34
CDK7-208ENST00000512687 KCTD10Q9H3F6 313 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 ATXN3LQ9H3M9 355 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 BRD9Q9H8M2 597 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
CDK7-208ENST00000512687 MYOFQ9NZM1 2061 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 MYBPHLA2RUH7 354 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 FAM170BA6NMN3 283 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 GFRA3O60609 400 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 PRPF40AO75400 957 aaKnown RBP12.89□□□□□ -0.35
CDK7-208ENST00000512687 TADA3O75528 432 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 TNNI1P19237 187 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 LMO2P25791 158 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
CDK7-208ENST00000512687 SNRPFP62306 86 aaKnown RBP12.89□□□□□ -0.35
CDK7-208ENST00000512687 MYL7Q01449 175 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 FZD5Q13467 585 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 DDR2Q16832 855 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 SPATA18Q8TC71 538 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms