RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 BUD31P41223 144 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 IL12RB1P42701 662 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 STARD6P59095 220 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 ST5P78524 1137 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 YWHAHQ04917 246 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 DUSP4Q13115 394 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 FGL2Q14314 439 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 PPP1R7Q15435 360 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 IFI16Q16666 785 aaKnown RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 UGT8Q16880 541 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 KRBOX4Q5JUW0 171 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 TAF3Q5VWG9 929 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 MBNL2Q5VZF2 373 aaKnown RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 CCDC62Q6P9F0 684 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 FBXO38Q6PIJ6 1188 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 OSTM1Q86WC4 334 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 C12orf50Q8NA57 414 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 OR6C4Q8NGE1 309 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 TSPEARQ8WU66 669 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 TBC1D5Q92609 795 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 SLC35A4Q96G79 324 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 LENG8Q96PV6 779 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 UBL7Q96S82 380 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 ZFYVE21Q9BQ24 234 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 MCMBPQ9BTE3 642 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 BOCQ9BWV1 1114 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 FUT8Q9BYC5 575 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 ACE2Q9BYF1 805 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 ST6GALNAC4Q9H4F1 302 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 YY1AP1Q9H869 796 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 INCENPQ9NQS7 918 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 GPR27Q9NS67 375 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 ZNHIT6Q9NWK9 470 aaKnown RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 FETUBQ9UGM5 382 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 FAM153AQ9UHL3 310 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 CAMK2AQ9UQM7 478 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 PCDHB12Q9Y5F1 795 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 V9GYY5 206 aaPredicted RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 A4D1N5 150 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 URADA6NGE7 173 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 A8MV72 311 aaPredicted RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 A8MXE2 369 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 ISM1B1AKI9 464 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 MCF2LO15068 1137 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 TIAF1O95411 115 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 FTCDO95954 541 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 SLFN14P0C7P3 912 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 TMIGD3P0DMS9 266 aaPredicted RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 PDE6AP16499 860 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 TM4SF1P30408 202 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 GCH1P30793 250 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 IL15P40933 162 aaPredicted RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 IFNAR2P48551 515 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 CENPAP49450 140 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 SLC16A1P53985 500 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 ETF1P62495 437 aaKnown RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 IRF9Q00978 393 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 EPS8Q12929 822 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 DCAF17Q5H9S7 520 aaPredicted RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 FAM47CQ5HY64 1035 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 ATG16L1Q676U5 607 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 TPGS2Q68CL5 300 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 KLHL17Q6TDP4 642 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 IKBIPQ70UQ0 350 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 TAX1BP1Q86VP1 789 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 CXorf67Q86X51 503 aaPredicted RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 SP8Q8IXZ3 490 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 ADSSL1Q8N142 457 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 CYP2W1Q8TAV3 490 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 NRG4Q8WWG1 115 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 FBXW5Q969U6 566 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 RGMAQ96B86 450 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 FAM46AQ96IP4 442 aaKnown RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 VPS50Q96JG6 964 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 WDR18Q9BV38 432 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 THUMPD3Q9BV44 507 aaKnown RBP6.71□□□□□ -1.33
CHD1-208ENST00000512392 ABHD16BQ9H3Z7 469 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 SMURF1Q9HCE7 757 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 MID1IP1Q9NPA3 183 aa6.71□□□□□ -1.33
CHD1-208ENST00000512392 A0A1W2PQ09 198 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 E2F6O75461 281 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 BCAS2O75934 225 aaPredicted RBP6.71□□□□□ -1.34
CHD1-208ENST00000512392 CSPG5O95196 566 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 AKT1P31749 480 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 GP5P40197 560 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 RABIFP47224 123 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 JAM2P57087 298 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 RPS16P62249 146 aaKnown RBP6.71□□□□□ -1.34
CHD1-208ENST00000512392 NKX6-1P78426 367 aaPredicted RBP6.71□□□□□ -1.34
CHD1-208ENST00000512392 SOX4Q06945 474 aaPredicted RBP6.71□□□□□ -1.34
CHD1-208ENST00000512392 NSUN2Q08J23 767 aaKnown RBP eCLIP6.71□□□□□ -1.34
CHD1-208ENST00000512392 BMPR2Q13873 1038 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 ZNF174Q15697 407 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 C16orf59Q7L2K0 433 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 RRAGAQ7L523 313 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 FIBCD1Q8N539 461 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 FANCBQ8NB91 859 aa6.71□□□□□ -1.34
CHD1-208ENST00000512392 ATP6V0A1Q93050 837 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms