RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ZACNQ401N2 412 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 COBLL1Q53SF7 1204 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 ZNF658Q5TYW1 1059 aaPredicted RBP12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 ITIH5Q86UX2 942 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 SIX5Q8N196 739 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 GIPC2Q8TF65 315 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 ASB16Q96NS5 453 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 KCNH6Q9H252 994 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 IL21Q9HBE4 155 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 CRTAC1Q9NQ79 661 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 RMND1Q9NWS8 449 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 CDH9Q9ULB4 789 aa12.44□□□□□ -0.42
SH3RF1-205ENST00000511421 IKBKBO14920 756 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 PHACTR2O75167 634 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 SMC2O95347 1197 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 HMGA1P17096 107 aaKnown RBP12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 CYP2F1P24903 491 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 RPL13P26373 211 aaKnown RBP12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 ADAM9Q13443 819 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 BIRC3Q13489 604 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 NCOA4Q13772 614 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 EDRF1Q3B7T1 1238 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 CFAP221Q4G0U5 840 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 CWF19L1Q69YN2 538 aaKnown RBP12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 SV2AQ7L0J3 742 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 FAM200AQ8TCP9 573 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 SMARCD2Q92925 531 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 SMARCE1Q969G3 411 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 ELSPBP1Q96BH3 223 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 MKNK1Q9BUB5 465 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 TRPV4Q9HBA0 871 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
SH3RF1-205ENST00000511421 PDGFRBP09619 1106 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 GABRR2P28476 465 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 PSMC2P35998 433 aaKnown RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 GNL1P36915 607 aaPredicted RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 CLCN5P51795 746 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 VAMP7P51809 220 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 TNNC1P63316 161 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ENPEPQ07075 957 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 VEPH1Q14D04 833 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 DDR2Q16832 855 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 STXBP5Q5T5C0 1151 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 SDHAF4Q5VUM1 108 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ASTLQ6HA08 431 aaPredicted RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 FAM186BQ8IYM0 893 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 TMEM105Q8N8V8 129 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ZSCAN18Q8TBC5 510 aaPredicted RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ELMO3Q96BJ8 720 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 FUBP3Q96I24 572 aaKnown RBP eCLIP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 GPR88Q9GZN0 384 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 MFSD1Q9H3U5 465 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ZFP14Q9HCL3 533 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 CA14Q9ULX7 337 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 CACNA1HO95180 2353 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 NCANO14594 1321 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 FGF19O95750 216 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 PPP3CAQ08209 521 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ZNF699Q32M78 642 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 SPATA2LQ8IUW3 424 aaPredicted RBP12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 STKLD1Q8NE28 680 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 FLCNQ8NFG4 579 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 OR6B3Q8NGW1 331 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 MYLPFQ96A32 169 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ATXN3LQ9H3M9 355 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 SMYD3Q9H7B4 428 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 ARHGEF3Q9NR81 526 aa12.42□□□□□ -0.42
SH3RF1-205ENST00000511421 PI15O43692 258 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 F11P03951 625 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 CSH1P0DML2 217 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 CSH2P0DML3 217 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 CDC25CP30307 473 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 VIPR2P41587 438 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 MAGEA11P43364 429 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 PMS1P54277 932 aaKnown RBP12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 CDH8P55286 799 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 RPL10AP62906 217 aaKnown RBP12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 ZNF667Q5HYK9 610 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 VITQ6UXI7 678 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 ZC3H3Q8IXZ2 948 aaKnown RBP12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 PRSS33Q8NF86 280 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 MYCBPAPQ8TBZ2 947 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 RSPRY1Q96DX4 576 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 PCED1BQ96HM7 432 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms