RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 FAM84AQ96KN4 292 aa11.04□□□□□ -0.64
COPS4-207ENST00000509317 PLEKHA5Q9HAU0 1116 aa11.04□□□□□ -0.64
COPS4-207ENST00000509317 TMEM9BQ9NQ34 198 aa11.04□□□□□ -0.64
COPS4-207ENST00000509317 TDP1Q9NUW8 608 aa11.04□□□□□ -0.64
COPS4-207ENST00000509317 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
COPS4-207ENST00000509317 CITO14578 2027 aa11.04□□□□□ -0.64
COPS4-207ENST00000509317 NUP210Q8TEM1 1887 aaPredicted RBP11.04□□□□□ -0.64
COPS4-207ENST00000509317 SCAMP3O14828 347 aaKnown RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 KHNYNO15037 678 aaKnown RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 HAPLN1P10915 354 aaPredicted RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 HNRNPLP14866 589 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPS4-207ENST00000509317 CYP3A5P20815 502 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 DRD1P21728 446 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 WEE1P30291 646 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 TUFMP49411 452 aaKnown RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 MESP2Q0VG99 397 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 ZC2HC1CQ53FD0 456 aaPredicted RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 C2orf27AQ580R0 203 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 SPATA1Q5VX52 437 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 PMS2CLQ68D20 193 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 SCARA3Q6AZY7 606 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 SLC39A4Q6P5W5 647 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 LRSAM1Q6UWE0 723 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 SYT13Q7L8C5 426 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 CYP2U1Q7Z449 544 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 RLN3Q8WXF3 142 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 PIGKQ92643 395 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 NTPCRQ9BSD7 190 aaKnown RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 PI4K2AQ9BTU6 479 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 OXCT2Q9BYC2 517 aaPredicted RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 LINC00597Q9H2U6 94 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 TRPC7Q9HCX4 862 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 ZDHHC4Q9NPG8 344 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 CIZ1Q9ULV3 898 aaPredicted RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 TBX20Q9UMR3 447 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 CACNA1EQ15878 2313 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 ABCA7Q8IZY2 2146 aa11.03□□□□□ -0.64
COPS4-207ENST00000509317 ATXN2Q99700 1313 aaKnown RBP11.03□□□□□ -0.64
COPS4-207ENST00000509317 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
COPS4-207ENST00000509317 PIRO00625 290 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 CYB561D2O14569 222 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 HCRTO43612 131 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 CEACAM1P13688 526 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 GUCY2CP25092 1073 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 LIG4P49917 911 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 NEK4P51957 841 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 MTF1Q14872 753 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 PTPAQ15257 358 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 DDR2Q16832 855 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 KRT79Q5XKE5 535 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 CD101Q93033 1021 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 FOXP1Q9H334 677 aaPredicted RBP11.02□□□□□ -0.65
COPS4-207ENST00000509317 RPF1Q9H9Y2 349 aaKnown RBP11.02□□□□□ -0.65
COPS4-207ENST00000509317 TMEM74BQ9NUR3 256 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
COPS4-207ENST00000509317 EBF1Q9UH73 591 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 TSC2P49815 1807 aa11.02□□□□□ -0.65
COPS4-207ENST00000509317 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 ANO9A1A5B4 782 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 TAF4O00268 1085 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 HNRNPDLO14979 420 aaKnown RBP11.01□□□□□ -0.65
COPS4-207ENST00000509317 OGTO15294 1046 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 CYP11A1P05108 521 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 CSRP1P21291 193 aaKnown RBP11.01□□□□□ -0.65
COPS4-207ENST00000509317 ACAT1P24752 427 aaKnown RBP11.01□□□□□ -0.65
COPS4-207ENST00000509317 PTGER3P43115 390 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 ACOT2P49753 483 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 SMTNP53814 917 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 SLC12A3P55017 1021 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 FAM193AP78312 1265 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 ORC2Q13416 577 aaPredicted RBP11.01□□□□□ -0.65
COPS4-207ENST00000509317 GNL2Q13823 731 aaKnown RBP11.01□□□□□ -0.65
COPS4-207ENST00000509317 PDIA5Q14554 519 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 TMEM132DQ14C87 1099 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 KARSQ15046 597 aaKnown RBP11.01□□□□□ -0.65
COPS4-207ENST00000509317 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 ZNF77Q15935 545 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 EML3Q32P44 896 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 ARSHQ5FYA8 562 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 MON1AQ86VX9 555 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 EFCAB13Q8IY85 973 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 TMEFF1Q8IYR6 380 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 CPA6Q8N4T0 437 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 MDGA1Q8NFP4 955 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 OR2I1PQ8NGU4 316 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 USP33Q8TEY7 942 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
COPS4-207ENST00000509317 MRPS31Q92665 395 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms