RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 DCLK1O15075 740 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SEC24BO95487 1268 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 ADRB2P07550 413 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 ODC1P11926 461 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 GUCY2CP25092 1073 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 AVPR1AP37288 418 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 GALK1P51570 392 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 FOSBP53539 338 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 ANAPC15P60006 121 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SPAG1Q07617 926 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SMARCB1Q12824 385 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 DMC1Q14565 340 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 KYAT1Q16773 422 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SPATA1Q5VX52 437 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 PMS2CLQ68D20 193 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 TRIM68Q6AZZ1 485 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 RINT1Q6NUQ1 792 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 C4orf32Q8N8J7 132 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 IGSF22Q8N9C0 903 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 TMEM161BQ8NDZ6 487 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 OR10T2Q8NGX3 314 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 RPLP0P6Q8NHW5 317 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SNX29Q8TEQ0 813 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 C2orf15Q8WU43 125 aaKnown RBP10.18□□□□□ -0.78
NEDD9-211ENST00000508546 KCNN1Q92952 543 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 USP13Q92995 863 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-211ENST00000508546 ACDQ96AP0 544 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 LRIG1Q96JA1 1093 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SENP8Q96LD8 212 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 RUSC1Q9BVN2 902 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 RAB34Q9BZG1 259 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 ZCWPW1Q9H0M4 648 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 SMG9Q9H0W8 520 aaKnown RBP10.18□□□□□ -0.78
NEDD9-211ENST00000508546 FOXP1Q9H334 677 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-211ENST00000508546 TMEM9BQ9NQ34 198 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 TDP1Q9NUW8 608 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 POLR3BQ9NW08 1133 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-211ENST00000508546 CCL26Q9Y258 94 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 MYOFQ9NZM1 2061 aa10.18□□□□□ -0.78
NEDD9-211ENST00000508546 ADAMTS9Q9P2N4 1935 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 SFI1A8K8P3 1242 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 E9PMD0 336 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 JAK2O60674 1132 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 F11P03951 625 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 MAPTP10636 758 aaKnown RBP10.17□□□□□ -0.78
NEDD9-211ENST00000508546 ARSAP15289 507 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 GJA4P35212 333 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 TRAPPC10P48553 1259 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 SMTNP53814 917 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 NLRP12P59046 1061 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 C19orf57Q0VDD7 668 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 SCAPQ12770 1279 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 BFSP1Q12934 665 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 ZNF268Q14587 947 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-211ENST00000508546 PDGFRLQ15198 375 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 TAF12Q16514 161 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 MGAT5BQ3V5L5 792 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 SLC39A12Q504Y0 691 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 TTC38Q5R3I4 469 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-211ENST00000508546 TMEM150AQ86TG1 271 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 MAB21L3Q8N8X9 362 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 SPPL2BQ8TCT7 592 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 HNRNPLLQ8WVV9 542 aaKnown RBP10.17□□□□□ -0.78
NEDD9-211ENST00000508546 SEPT5Q99719 369 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-211ENST00000508546 P2RY13Q9BPV8 354 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 DSEQ9UL01 958 aa10.17□□□□□ -0.78
NEDD9-211ENST00000508546 PTPN13Q12923 2485 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 SPAARA0A1B0GVQ0 90 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 PPEF2O14830 753 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 FAM189A1O60320 539 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 HAPLN1P10915 354 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 PLS3P13797 630 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 HMGA1P17096 107 aaKnown RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 GBP1P32455 592 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 TNFSF9P41273 254 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 DGKEP52429 567 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 GUCY1B3Q02153 619 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 ENOX2Q16206 610 aaKnown RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 USP39Q53GS9 565 aaKnown RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 MON1AQ86VX9 555 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 CD302Q8IX05 232 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 CPA6Q8N4T0 437 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 CCDC26Q8TAB7 109 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 RIN3Q8TB24 985 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 GIPC2Q8TF65 315 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 EZH1Q92800 747 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 CD101Q93033 1021 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 CRELD1Q96HD1 420 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 HNRNPABQ99729 332 aaKnown RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 ECT2Q9H8V3 914 aa10.16□□□□□ -0.78
NEDD9-211ENST00000508546 EVLQ9UI08 416 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-211ENST00000508546 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 H0YCG3 227 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 PIRO00625 290 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms