RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 NRG2O14511 850 aaPredicted RBP16.67■□□□□ 0.26
CLDND1-211ENST00000506575 STAU1O95793 577 aaKnown RBP16.67■□□□□ 0.26
CLDND1-211ENST00000506575 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 GABRR2P28476 465 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 CDC25CP30307 473 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 PLA2G5P39877 138 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 CLDN10P78369 228 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 MAPRE1Q15691 268 aaKnown RBP16.67■□□□□ 0.26
CLDND1-211ENST00000506575 NFIL3Q16649 462 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 ZNF699Q32M78 642 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 IER5LQ5T953 404 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
CLDND1-211ENST00000506575 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
CLDND1-211ENST00000506575 ZNF334Q9HCZ1 680 aaPredicted RBP16.67■□□□□ 0.26
CLDND1-211ENST00000506575 NXF1Q9UBU9 619 aaKnown RBP16.67■□□□□ 0.26
CLDND1-211ENST00000506575 MAPK13O15264 365 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 HCRTO43612 131 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 TACC1O75410 805 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 FAM163BP0C2L3 166 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 KRT13P13646 458 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 NPR3P17342 541 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 AOC1P19801 751 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 FCARP24071 287 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 CYP2F1P24903 491 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 GNL1P36915 607 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 NUBP1P53384 320 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 PSMC1P62191 440 aaKnown RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 DLG4P78352 724 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 ADAM9Q13443 819 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 NCOA4Q13772 614 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 POTEHQ6S545 545 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 GAREM2Q75VX8 874 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 FAM186BQ8IYM0 893 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 SMYD4Q8IYR2 804 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 TMEM105Q8N8V8 129 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 OR6B3Q8NGW1 331 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 E2F7Q96AV8 911 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 FUBP3Q96I24 572 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 SHDQ96IW2 340 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 ZSWIM3Q96MP5 696 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 PKMYT1Q99640 499 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 GTPBP4Q9BZE4 634 aaKnown RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 PLA2G2FQ9BZM2 168 aa16.66■□□□□ 0.26
CLDND1-211ENST00000506575 MAGEC2Q9UBF1 373 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-211ENST00000506575 MYBPHLA2RUH7 354 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 IKBKBO14920 756 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 ATP2C2O75185 946 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 CSH1P0DML2 217 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 CSH2P0DML3 217 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 LMO2P25791 158 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 PSMC2P35998 433 aaKnown RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 VAMP7P51809 220 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 PTPN5P54829 565 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 DDR2Q16832 855 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 CFAP221Q4G0U5 840 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 ZNF667Q5HYK9 610 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 GPR158Q5T848 1215 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 ZNF658Q5TYW1 1059 aaPredicted RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 CWF19L1Q69YN2 538 aaKnown RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 FAM171BQ6P995 826 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 INTS8Q75QN2 995 aaKnown RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 SCN4BQ8IWT1 228 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 PRSS33Q8NF86 280 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 TRMT61BQ9BVS5 477 aaKnown RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 XYLT2Q9H1B5 865 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 BRD9Q9H8M2 597 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 TRPV4Q9HBA0 871 aa16.65■□□□□ 0.26
CLDND1-211ENST00000506575 MAGED2Q9UNF1 606 aaPredicted RBP16.65■□□□□ 0.26
CLDND1-211ENST00000506575 A8MXQ7 604 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 DPYSL4O14531 572 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 AKAP3O75969 853 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 P4HA1P13674 534 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 PSMC3P17980 439 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
CLDND1-211ENST00000506575 VIPR2P41587 438 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 MAGEA11P43364 429 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 GPR15P49685 360 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 CYP4F8P98187 520 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 CYP27A1Q02318 531 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 GRM2Q14416 872 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 MLF2Q15773 248 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-211ENST00000506575 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 SGSM1Q2NKQ1 1148 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 ZACNQ401N2 412 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 SLC44A4Q53GD3 710 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 STXBP5Q5T5C0 1151 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 PHLDB3Q6NSJ2 640 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 YAF2Q8IY57 180 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 DEPDC1BQ8WUY9 529 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 ERCC4Q92889 916 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms