RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 KCTD10Q9H3F6 313 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 SLITRK6Q9H5Y7 841 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 DMAC2Q9NW81 257 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 HOOK1Q9UJC3 728 aaKnown RBP27.19■■□□□ 1.94
PVT1-201ENST00000504719 COL4A3Q01955 1670 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 GABRR2P28476 465 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 VIPR2P41587 438 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 GRM2Q14416 872 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 VITQ6UXI7 678 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 ATOH1Q92858 354 aaPredicted RBP27.18■■□□□ 1.94
PVT1-201ENST00000504719 ERCC4Q92889 916 aaPredicted RBP27.18■■□□□ 1.94
PVT1-201ENST00000504719 PI4K2AQ9BTU6 479 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 MKNK1Q9BUB5 465 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 ATXN3LQ9H3M9 355 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 SIT1Q9Y3P8 196 aa27.18■■□□□ 1.94
PVT1-201ENST00000504719 HCRTO43612 131 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 PSMC3P17980 439 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 PCSK1P29120 753 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 MRE11P49959 708 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 STXBP5Q5T5C0 1151 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 SLC9A9Q8IVB4 645 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 PLEKHO2Q8TD55 490 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 KBTBD7Q8WVZ9 684 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 TRMT61BQ9BVS5 477 aaKnown RBP27.17■■□□□ 1.94
PVT1-201ENST00000504719 FOXQ1Q9C009 403 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 IL21Q9HBE4 155 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 FAM86C1Q9NVL1 165 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 GTF3C4Q9UKN8 822 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 CACNA1HO95180 2353 aa27.17■■□□□ 1.94
PVT1-201ENST00000504719 KANSL1LA0AUZ9 987 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 PDXKO00764 312 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 SMC2O95347 1197 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 CLEC17AQ6ZS10 378 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 MFSD6LQ8IWD5 586 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 PJA1Q8NG27 643 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 DEPDC1BQ8WUY9 529 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 DNASE1L2Q92874 299 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 E2F7Q96AV8 911 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 ABCB6Q9NP58 842 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 RMND1Q9NWS8 449 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 DLGAP2Q9P1A6 1054 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 MAPK8IP1Q9UQF2 711 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 COL4A2P08572 1712 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 NCANO14594 1321 aa27.16■■□□□ 1.94
PVT1-201ENST00000504719 OBSL1O75147 1896 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 HEPACAM2A8MVW5 462 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 KIF20AO95235 890 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 DCNP07585 359 aaKnown RBP27.15■■□□□ 1.94
PVT1-201ENST00000504719 WARSP23381 471 aaKnown RBP27.15■■□□□ 1.94
PVT1-201ENST00000504719 CDC25CP30307 473 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 GPR15P49685 360 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 TAF12Q16514 161 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 ARHGAP15Q53QZ3 475 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 FAM171BQ6P995 826 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 ELOA2Q8IYF1 753 aaPredicted RBP27.15■■□□□ 1.94
PVT1-201ENST00000504719 SMARCE1Q969G3 411 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 GSDMAQ96QA5 445 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 BRD9Q9H8M2 597 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 PCDHA5Q9Y5H7 936 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 TICRRQ7Z2Z1 1910 aa27.15■■□□□ 1.94
PVT1-201ENST00000504719 MYBPHLA2RUH7 354 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 HMGA1P17096 107 aaKnown RBP27.14■■□□□ 1.94
PVT1-201ENST00000504719 CYP2F1P24903 491 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 LMO2P25791 158 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 CASP4P49662 377 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 CCDC142Q17RM4 750 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 GPR158Q5T848 1215 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 SPATA20Q8TB22 786 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 PARD3BQ8TEW8 1205 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 RSPRY1Q96DX4 576 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 MMS19Q96T76 1030 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 SYT15Q9BQS2 421 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 HEBP1Q9NRV9 189 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 CDH9Q9ULB4 789 aa27.14■■□□□ 1.94
PVT1-201ENST00000504719 PTPRDP23468 1912 aa27.14■■□□□ 1.93
PVT1-201ENST00000504719 LRRIQ3A6PVS8 624 aaPredicted RBP27.13■■□□□ 1.93
PVT1-201ENST00000504719 ATP2C2O75185 946 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 STAU1O95793 577 aaKnown RBP27.13■■□□□ 1.93
PVT1-201ENST00000504719 NR3C1P04150 777 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 FAM163BP0C2L3 166 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 WEE1P30291 646 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 GDI1P31150 447 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 CLDN10P78369 228 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 CYP4F8P98187 520 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 TRPC3Q13507 836 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 CFAP221Q4G0U5 840 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 TPRG1Q6ZUI0 275 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 SPATA2LQ8IUW3 424 aaPredicted RBP27.13■■□□□ 1.93
PVT1-201ENST00000504719 ARID3BQ8IVW6 561 aaPredicted RBP27.13■■□□□ 1.93
PVT1-201ENST00000504719 SMYD4Q8IYR2 804 aaPredicted RBP27.13■■□□□ 1.93
PVT1-201ENST00000504719 IRF7Q92985 503 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 FUBP3Q96I24 572 aaKnown RBP eCLIP27.13■■□□□ 1.93
PVT1-201ENST00000504719 GCNAQ96QF7 691 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 TASP1Q9H6P5 420 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 TRPV5Q9NQA5 729 aa27.13■■□□□ 1.93
PVT1-201ENST00000504719 ZNF638Q14966 1978 aaKnown RBP27.13■■□□□ 1.93
PVT1-201ENST00000504719 GREB1Q4ZG55 1949 aa27.12■■□□□ 1.93
PVT1-201ENST00000504719 LRRN2O75325 713 aa27.12■■□□□ 1.93
PVT1-201ENST00000504719 TACC1O75410 805 aa27.12■■□□□ 1.93
PVT1-201ENST00000504719 CSH1P0DML2 217 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms