RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SPICE1Q8N0Z3 855 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 OR5AN1Q8NGI8 311 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 SDR42E1Q8WUS8 393 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 MBD6Q96DN6 1003 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 DYNLL2Q96FJ2 89 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 AJUBAQ96IF1 538 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 CCDC136Q96JN2 1154 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 MROH8Q9H579 483 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 PARD6AQ9NPB6 346 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 KCNG1Q9UIX4 513 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 ADAM29Q9UKF5 820 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 ZNF532Q9HCE3 1301 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 MYO5AQ9Y4I1 1855 aaKnown RBP7.58□□□□□ -1.2
VIM-207ENST00000495528 GOLGA8AA7E2F4 631 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 GOLGA8BA8MQT2 603 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 SMIM22K7EJ46 135 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 PRKAB2O43741 272 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 B4GALT4O60513 344 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 CUTAO60888 179 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 FLOT1O75955 427 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 IGHDP01880 384 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 AKR1B1P15121 316 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 GUCY2FP51841 1108 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 EPHB4P54760 987 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 BCAR1P56945 870 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 TLE2Q04725 743 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 FZD5Q13467 585 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 CT83Q5H943 113 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 TMEM200BQ69YZ2 307 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 CCDC62Q6P9F0 684 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 TMEM179Q6ZVK1 233 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 LARP4Q71RC2 724 aaKnown RBP eCLIP7.58□□□□□ -1.2
VIM-207ENST00000495528 KANSL1Q7Z3B3 1105 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 RALYLQ86SE5 291 aaKnown RBP7.58□□□□□ -1.2
VIM-207ENST00000495528 ABRAQ8N0Z2 381 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 LCORLQ8N3X6 602 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 MB21D1Q8N884 522 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
VIM-207ENST00000495528 AHCYL2Q96HN2 611 aaKnown RBP7.58□□□□□ -1.2
VIM-207ENST00000495528 CRNKL1Q9BZJ0 848 aaKnown RBP7.58□□□□□ -1.2
VIM-207ENST00000495528 KATNBL1Q9H079 304 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 ADAM7Q9H2U9 754 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 VCPKMTQ9H867 229 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 IL1RAPL2Q9NP60 686 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 C14orf119Q9NWQ9 140 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 FAM184BQ9ULE4 1060 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 USP18Q9UMW8 372 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 TMX2Q9Y320 296 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 DUSP10Q9Y6W6 482 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 CDK5RAP2Q96SN8 1893 aa7.58□□□□□ -1.2
VIM-207ENST00000495528 FOCADQ5VW36 1801 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 MAST2Q6P0Q8 1798 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 ADAMTS20P59510 1910 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 hCG_2014768A0A024R1R8 64 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 GOLIM4O00461 696 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 PGK1P00558 417 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 PGK2P07205 417 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 CLTBP09497 229 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 INHBBP09529 407 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 RARBP10826 455 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 FCER1AP12319 257 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 NCLP19338 710 aaKnown RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 ETV4P43268 484 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 USP10Q14694 798 aaKnown RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 EIF4HQ15056 248 aaKnown RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 TTF1Q15361 905 aaPredicted RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 DGKDQ16760 1214 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 BORAQ6PGQ7 559 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 SPOCD1Q6ZMY3 1216 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 FERMT3Q86UX7 667 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 ERC1Q8IUD2 1116 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 REXO1L1PQ8IX06 675 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 RPAP2Q8IXW5 612 aaPredicted RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 XYLT2Q9H1B5 865 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 RWDD1Q9H446 243 aaPredicted RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 ARMT1Q9H993 441 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 XPNPEP3Q9NQH7 507 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 FBXO28Q9NVF7 368 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 KCMF1Q9P0J7 381 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 SAE1Q9UBE0 346 aaPredicted RBP7.57□□□□□ -1.2
VIM-207ENST00000495528 SWAP70Q9UH65 585 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 ADAMTS5Q9UNA0 930 aa7.57□□□□□ -1.2
VIM-207ENST00000495528 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 MYH1P12882 1939 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 CYP2D7A0A087X1C5 515 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 KIAA0355O15063 1070 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 B4GALT3O60512 393 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 PQBP1O60828 265 aaKnown RBP7.56□□□□□ -1.2
VIM-207ENST00000495528 KATNA1O75449 491 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 SLC25A27O95847 323 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 LPLP06858 475 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 EEF2P13639 858 aaKnown RBP7.56□□□□□ -1.2
VIM-207ENST00000495528 FOSL2P15408 326 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 CNR2P34972 360 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 MEOX1P50221 254 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 MANFP55145 182 aaKnown RBP7.56□□□□□ -1.2
VIM-207ENST00000495528 ICA1Q05084 483 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 BCL6BQ8N143 479 aaPredicted RBP7.56□□□□□ -1.2
VIM-207ENST00000495528 CNTD1Q8N815 330 aa7.56□□□□□ -1.2
VIM-207ENST00000495528 DYDC2Q96IM9 177 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms