RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 CCDC142Q17RM4 750 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 GUF1Q8N442 669 aaKnown RBP19.27■□□□□ 0.67
COL20A1-207ENST00000494913 ENGASEQ8NFI3 743 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 PKMYT1Q99640 499 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 TBC1D17Q9HA65 648 aa19.27■□□□□ 0.67
COL20A1-207ENST00000494913 MYBPHLA2RUH7 354 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 AOC1P19801 751 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 WARSP23381 471 aaKnown RBP19.26■□□□□ 0.67
COL20A1-207ENST00000494913 VIPR2P41587 438 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 AP3M2P53677 418 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 TNNC1P63316 161 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 DLG4P78352 724 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 FAM160A1Q05DH4 1040 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 STXBP5Q5T5C0 1151 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 TDRD10Q5VZ19 366 aaKnown RBP19.26■□□□□ 0.67
COL20A1-207ENST00000494913 SPATA2LQ8IUW3 424 aaPredicted RBP19.26■□□□□ 0.67
COL20A1-207ENST00000494913 SYT15Q9BQS2 421 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 MRPL45Q9BRJ2 306 aaKnown RBP19.26■□□□□ 0.67
COL20A1-207ENST00000494913 SNX25Q9H3E2 840 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 ABCB6Q9NP58 842 aa19.26■□□□□ 0.67
COL20A1-207ENST00000494913 NXF1Q9UBU9 619 aaKnown RBP19.26■□□□□ 0.67
COL20A1-207ENST00000494913 C4BPAP04003 597 aaKnown RBP19.25■□□□□ 0.67
COL20A1-207ENST00000494913 NR2F2P24468 414 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 ATICP31939 592 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
COL20A1-207ENST00000494913 GPR15P49685 360 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 PSMC1P62191 440 aaKnown RBP19.25■□□□□ 0.67
COL20A1-207ENST00000494913 PFKPQ01813 784 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 GRM2Q14416 872 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 SLC44A4Q53GD3 710 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 SDHAF4Q5VUM1 108 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 FAM171BQ6P995 826 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 SMYD4Q8IYR2 804 aaPredicted RBP19.25■□□□□ 0.67
COL20A1-207ENST00000494913 TMC2Q8TDI7 906 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 SYAP1Q96A49 352 aaPredicted RBP19.25■□□□□ 0.67
COL20A1-207ENST00000494913 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 CDH9Q9ULB4 789 aa19.25■□□□□ 0.67
COL20A1-207ENST00000494913 TACC1O75410 805 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 CLSTN1O94985 981 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 STAU1O95793 577 aaKnown RBP19.24■□□□□ 0.67
COL20A1-207ENST00000494913 NUBP1P53384 320 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 PTPN5P54829 565 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 NHLH1Q02575 133 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 TCF15Q12870 199 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 DDR2Q16832 855 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 ARHGAP15Q53QZ3 475 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 GPR158Q5T848 1215 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 GPIHBP1Q8IV16 184 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 STKLD1Q8NE28 680 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 OR6B3Q8NGW1 331 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 SHDQ96IW2 340 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 TRMT61BQ9BVS5 477 aaKnown RBP19.24■□□□□ 0.67
COL20A1-207ENST00000494913 TRPV4Q9HBA0 871 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 IL21Q9HBE4 155 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 CRTAC1Q9NQ79 661 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 RMND1Q9NWS8 449 aa19.24■□□□□ 0.67
COL20A1-207ENST00000494913 GALR2O43603 387 aaPredicted RBP19.23■□□□□ 0.67
COL20A1-207ENST00000494913 AKAP3O75969 853 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 PSMC3P17980 439 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 RPL13P26373 211 aaKnown RBP19.23■□□□□ 0.67
COL20A1-207ENST00000494913 RPL10AP62906 217 aaKnown RBP19.23■□□□□ 0.67
COL20A1-207ENST00000494913 ADAM9Q13443 819 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 NCOA4Q13772 614 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 NFIL3Q16649 462 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 CFAP221Q4G0U5 840 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 PHLDB3Q6NSJ2 640 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 VITQ6UXI7 678 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 ERCC4Q92889 916 aaPredicted RBP19.23■□□□□ 0.67
COL20A1-207ENST00000494913 GCNAQ96QF7 691 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 BRD9Q9H8M2 597 aa19.23■□□□□ 0.67
COL20A1-207ENST00000494913 MAGEC2Q9UBF1 373 aaPredicted RBP19.23■□□□□ 0.67
COL20A1-207ENST00000494913 MAGED2Q9UNF1 606 aaPredicted RBP19.23■□□□□ 0.67
COL20A1-207ENST00000494913 IKBKBO14920 756 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MAPK13O15264 365 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 SMC2O95347 1197 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 VNN1O95497 513 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 FAM163BP0C2L3 166 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 HMGA1P17096 107 aaKnown RBP19.22■□□□□ 0.67
COL20A1-207ENST00000494913 CDC25CP30307 473 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 STARD6P59095 220 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 CYP4F8P98187 520 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MAPRE1Q15691 268 aaKnown RBP19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MLF2Q15773 248 aaPredicted RBP19.22■□□□□ 0.67
COL20A1-207ENST00000494913 ZNF699Q32M78 642 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 C4orf50Q6ZRC1 276 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 ARID3BQ8IVW6 561 aaPredicted RBP19.22■□□□□ 0.67
COL20A1-207ENST00000494913 SCN4BQ8IWT1 228 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 ELMO3Q96BJ8 720 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 FUBP3Q96I24 572 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL20A1-207ENST00000494913 TIGD1Q96MW7 591 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 GSDMAQ96QA5 445 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MKNK1Q9BUB5 465 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 HOOK1Q9UJC3 728 aaKnown RBP19.22■□□□□ 0.67
COL20A1-207ENST00000494913 PCDHA5Q9Y5H7 936 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 CACNA1HO95180 2353 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 HEPACAM2A8MVW5 462 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 CSH1P0DML2 217 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 CSH2P0DML3 217 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 GDI1P31150 447 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 VAMP7P51809 220 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms