RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
RFC4-214ENST00000494047 AADACL2Q6P093 401 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 DCUN1D2Q6PH85 259 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 FBXO46Q6PJ61 603 aaPredicted RBP12.11□□□□□ -0.47
RFC4-214ENST00000494047 TMEM270Q6UE05 265 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 VSIG1Q86XK7 387 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 ZBTB8OSQ8IWT0 167 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 SLITRK1Q96PX8 696 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
RFC4-214ENST00000494047 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 NIF3L1Q9GZT8 377 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 CHST7Q9NS84 486 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 CTNNAL1Q9UBT7 734 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 PRKAG3Q9UGI9 489 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
RFC4-214ENST00000494047 TMEM191CA6NGB0 347 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 ALOX15BO15296 676 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 TOM1L1O75674 476 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 STBD1O95210 358 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 IL18RAPO95256 599 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 ASS1P00966 412 aaKnown RBP12.1□□□□□ -0.47
RFC4-214ENST00000494047 KRT1P04264 644 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 TMEM191BP0C7N4 346 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 TROVE2P10155 538 aaKnown RBP eCLIP12.1□□□□□ -0.47
RFC4-214ENST00000494047 P4HA1P13674 534 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 ARL2P36404 184 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 IFNAR2P48551 515 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 SLC26A2P50443 739 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 SNX16P57768 344 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
RFC4-214ENST00000494047 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
RFC4-214ENST00000494047 PDK4Q16654 411 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 KYNUQ16719 465 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 P3H1Q32P28 736 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 SNRNP48Q6IEG0 339 aaKnown RBP12.1□□□□□ -0.47
RFC4-214ENST00000494047 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 TRABD2AQ86V40 505 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 PPIL6Q8IXY8 311 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 LHX5Q9H2C1 402 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 XPNPEP1Q9NQW7 623 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 ARHGEF3Q9NR81 526 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 FGFR1OP2Q9NVK5 253 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 MCM8Q9UJA3 840 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 AGTPBP1Q9UPW5 1226 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 ZNF148Q9UQR1 794 aa12.1□□□□□ -0.47
RFC4-214ENST00000494047 TCRBV7S2A1N4TA0A589 114 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 CFAP69A5D8W1 941 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 VGLL3A8MV65 326 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
RFC4-214ENST00000494047 TP73O15350 636 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 ZNF862O60290 1169 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 ATP9AO75110 1047 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 UNC5CO95185 931 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 IL1BP01584 269 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 PRMT2P55345 433 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 MTMR2Q13614 643 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 TFDP1Q14186 410 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 CRYMQ14894 314 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 HIF1AQ16665 826 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 DUOXA2Q1HG44 320 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 IER5Q5VY09 327 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 GPAT2Q6NUI2 795 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
RFC4-214ENST00000494047 C17orf99Q6UX52 265 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 GADL1Q6ZQY3 521 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 UBR7Q8N806 425 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 CPA5Q8WXQ8 436 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 BSNDQ8WZ55 320 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 BTBD6Q96KE9 485 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 DDX23Q9BUQ8 820 aaKnown RBP12.09□□□□□ -0.47
RFC4-214ENST00000494047 DNAI2Q9GZS0 605 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 ECT2Q9H8V3 914 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 SAR1AQ9NR31 198 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 HOMER2Q9NSB8 354 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 CLUHO75153 1309 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
RFC4-214ENST00000494047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 hCG_1818297A0A087WSY0 165 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 OGTO15294 1046 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ADCY3O60266 1144 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ASMTLO95671 621 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 TNNC2P02585 160 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 GSTA2P09210 222 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 KRT15P19012 456 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 HOXD10P28358 340 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ELF1P32519 619 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 CHKAP35790 457 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 SSR1P43307 286 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms