RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 UBR7Q8N806 425 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 WHAMMQ8TF30 809 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 CDY1Q9Y6F8 540 aa18.32■□□□□ 0.52
LIME1-208ENST00000493265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.31■□□□□ 0.52
LIME1-208ENST00000493265 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 F8VZ95 297 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 ADAM12O43184 909 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 GYPCP04921 128 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 TPM1P09493 284 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 CPB1P15086 417 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 IL9P15248 144 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 CD19P15391 556 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 CASP14P31944 242 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 OR1D2P34982 312 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 RAD23BP54727 409 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 TSPY1Q01534 308 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 MRPL58Q14197 206 aaKnown RBP18.31■□□□□ 0.52
LIME1-208ENST00000493265 LEXMQ3ZCV2 418 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 PDXDC1Q6P996 788 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 TTC39CQ8N584 583 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.31■□□□□ 0.52
LIME1-208ENST00000493265 SHC3Q92529 594 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
LIME1-208ENST00000493265 GPR88Q9GZN0 384 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 MTRRQ9UBK8 725 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 SSX2IPQ9Y2D8 614 aa18.31■□□□□ 0.52
LIME1-208ENST00000493265 ATG2AQ2TAZ0 1938 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 OR6C75A6NL08 312 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 LRRC53A6NM62 1247 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 CYP26A1O43174 497 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 PTPN1P18031 435 aaKnown RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 STAT1P42224 750 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 JAM2P57087 298 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 SLC39A12Q504Y0 691 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 MDH1BQ5I0G3 518 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 UNC93AQ86WB7 457 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 MRPL43Q8N983 215 aaKnown RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 SLC4A11Q8NBS3 891 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 ZNF397Q8NF99 534 aaPredicted RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 SPATA18Q8TC71 538 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 BAP1Q92560 729 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 ANP32BQ92688 251 aaKnown RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 JAKMIP2Q96AA8 810 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 MRPL38Q96DV4 380 aaKnown RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 TNIP3Q96KP6 325 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 PGLYRP2Q96PD5 576 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 CLSTN3Q9BQT9 956 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 ACBD6Q9BR61 282 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 TTYH3Q9C0H2 523 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 NGRNQ9NPE2 291 aaKnown RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 ACP6Q9NPH0 428 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 GTF3C4Q9UKN8 822 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 CAPN11Q9UMQ6 739 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 LUC7L2Q9Y383 392 aaKnown RBP18.3■□□□□ 0.52
LIME1-208ENST00000493265 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 BACE2Q9Y5Z0 518 aa18.3■□□□□ 0.52
LIME1-208ENST00000493265 MYBPHLA2RUH7 354 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 PI4K2BG5E9Z4 385 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 FSCN2O14926 492 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 TEX28O15482 410 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 GPR37L1O60883 481 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 LILRB3O75022 631 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 CNPP09543 421 aaKnown RBP18.29■□□□□ 0.52
LIME1-208ENST00000493265 KLRC2P26717 231 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 CDC25BP30305 580 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 SSTR3P32745 418 aaPredicted RBP18.29■□□□□ 0.52
LIME1-208ENST00000493265 SOX5P35711 763 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 CREMQ03060 361 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 TRIM14Q14142 442 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 PTPROQ16827 1216 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 FIGNQ5HY92 759 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
LIME1-208ENST00000493265 PTCRAQ6ISU1 281 aaPredicted RBP18.29■□□□□ 0.52
LIME1-208ENST00000493265 RBM23Q86U06 439 aaKnown RBP18.29■□□□□ 0.52
LIME1-208ENST00000493265 LRRTM3Q86VH5 581 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 GJD3Q8N144 294 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 C12orf29Q8N999 325 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 MED10Q9BTT4 135 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 EMILIN2Q9BXX0 1053 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 ZCWPW1Q9H0M4 648 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 LMAN2LQ9H0V9 348 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 CRTAC1Q9NQ79 661 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.29■□□□□ 0.52
LIME1-208ENST00000493265 TMLHEQ9NVH6 421 aa18.29■□□□□ 0.52
LIME1-208ENST00000493265 A0A1W2PQJ5 194 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
LIME1-208ENST00000493265 PER2O15055 1255 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 TBC1D4O60343 1298 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 CCDC130P13994 396 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 BRD2P25440 801 aaKnown RBP18.28■□□□□ 0.52
LIME1-208ENST00000493265 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms