RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ADSSL1Q8N142 457 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 C1orf127Q8N9H9 656 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 XXYLT1Q8NBI6 393 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 OR5B17Q8NGF7 314 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 PLEKHO2Q8TD55 490 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 COG1Q8WTW3 980 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 CASP10Q92851 521 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 POP1Q99575 1024 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 TIMM13Q9Y5L4 95 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 M0QZQ0 153 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 PDXKO00764 312 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 TGM5O43548 720 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 TRAPPC3O43617 180 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 TBC1D4O60343 1298 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 ATP1A1P05023 1023 aaKnown RBP10.05□□□□□ -0.8
BRCA1-219ENST00000491747 ADH1AP07327 375 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 WEE2P0C1S8 567 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 MAGEA9P43362 315 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 CASP4P49662 377 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 LILRA4P59901 499 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
BRCA1-219ENST00000491747 MEA1Q16626 185 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 VARS2Q5ST30 1063 aaKnown RBP10.05□□□□□ -0.8
BRCA1-219ENST00000491747 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 CCDC170Q8IYT3 715 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 ADAMTS19Q8TE59 1207 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 CCDC47Q96A33 483 aaKnown RBP10.05□□□□□ -0.8
BRCA1-219ENST00000491747 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 BORCS6Q96GS4 357 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 MMS19Q96T76 1030 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.05□□□□□ -0.8
BRCA1-219ENST00000491747 MTRRQ9UBK8 725 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 DENND4AQ7Z401 1863 aa10.05□□□□□ -0.8
BRCA1-219ENST00000491747 SYF2O95926 243 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 TRIM21P19474 475 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 CYP24A1Q07973 514 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SMAD4Q13485 552 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 IRF2BP1Q8IU81 584 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 GUF1Q8N442 669 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 ZNF516Q92618 1163 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 MTMR12Q9C0I1 747 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 KIAA1586Q9HCI6 787 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 MAN1C1Q9NR34 630 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SIX4Q9UIU6 781 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 TRAF3IP3Q9Y228 551 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 USP15Q9Y4E8 981 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 EIF3CLB5ME19 914 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SYN3O14994 580 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 EXOC3O60645 756 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 NR3C1P04150 777 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 ITGB3P05106 788 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 OR1D2P34982 312 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 PSMD6Q15008 389 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SMAD2Q15796 467 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 ZCWPW2Q504Y3 356 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 RARS2Q5T160 578 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 WDR59Q6PJI9 974 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SUSD6Q92537 303 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 ZBTB9Q96C00 473 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 DOCK6Q96HP0 2047 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 SENP8Q96LD8 212 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 EIF3CQ99613 913 aaKnown RBP10.04□□□□□ -0.8
BRCA1-219ENST00000491747 TSGA10Q9BZW7 698 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 CD320Q9NPF0 282 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 CDY1Q9Y6F8 540 aa10.04□□□□□ -0.8
BRCA1-219ENST00000491747 TRIM49BA6NDI0 452 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 RFPL2O75678 378 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 GLUD1P00367 558 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 POLR2BP30876 1174 aaKnown RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 KIF5AQ12840 1032 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 ANKS3Q6ZW76 656 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 CAPZA3Q96KX2 299 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 FAM107BQ9H098 131 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 AGAP1Q9UPQ3 857 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 BACE2Q9Y5Z0 518 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 SRGAP2O75044 1071 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 CST3P01034 146 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 SRGAP2BP0DMP2 458 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 DLATP10515 647 aaKnown RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 HOXB8P17481 243 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 PMS1P54277 932 aaKnown RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 DLG4P78352 724 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 ZBED6P86452 979 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 CREMQ03060 361 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 RAB33AQ14088 237 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 DNAJC21Q5F1R6 531 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms