RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PCSK1P29120 753 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 CCDC142Q17RM4 750 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 TPRG1Q6ZUI0 275 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 LIMS2Q7Z4I7 341 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 MKNK1Q9BUB5 465 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 IL21Q9HBE4 155 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 HEBP1Q9NRV9 189 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 DLGAP2Q9P1A6 1054 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 GTF3C4Q9UKN8 822 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 COL4A2P08572 1712 aa33.64■■■□□ 2.98
LDB1-204ENST00000490751 CST3P01034 146 aaPredicted RBP33.63■■■□□ 2.97
LDB1-204ENST00000490751 GDI1P31150 447 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 GPR15P49685 360 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 ANGPT1Q15389 498 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 ARHGAP15Q53QZ3 475 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 GPR158Q5T848 1215 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 KBTBD7Q8WVZ9 684 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 GCNAQ96QF7 691 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 GOLPH3LQ9H4A5 285 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 TICRRQ7Z2Z1 1910 aa33.63■■■□□ 2.97
LDB1-204ENST00000490751 HEPACAM2A8MVW5 462 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 LRRN2O75325 713 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 CDC25CP30307 473 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 CYP4F8P98187 520 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 UBXN2BQ14CS0 331 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 MFSD6LQ8IWD5 586 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 ZNF516Q92618 1163 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 IRF7Q92985 503 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 E2F7Q96AV8 911 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 RSPRY1Q96DX4 576 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 KCTD10Q9H3F6 313 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 ABCB6Q9NP58 842 aa33.62■■■□□ 2.97
LDB1-204ENST00000490751 CD72P21854 359 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 CASP4P49662 377 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 KRBA2Q6ZNG9 492 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 GPIHBP1Q8IV16 184 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 ARID3BQ8IVW6 561 aaPredicted RBP33.61■■■□□ 2.97
LDB1-204ENST00000490751 MMS19Q96T76 1030 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 SYT15Q9BQS2 421 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 LTB4R2Q9NPC1 389 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 DENND4CQ5VZ89 1909 aa33.61■■■□□ 2.97
LDB1-204ENST00000490751 MYBPHLA2RUH7 354 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 GLULP15104 373 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 CYP2F1P24903 491 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 SDHAF4Q5VUM1 108 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 SPATA2LQ8IUW3 424 aaPredicted RBP33.6■■■□□ 2.97
LDB1-204ENST00000490751 STKLD1Q8NE28 680 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 PLEKHO2Q8TD55 490 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 CCDC47Q96A33 483 aaKnown RBP33.6■■■□□ 2.97
LDB1-204ENST00000490751 DMAC2Q9NW81 257 aa33.6■■■□□ 2.97
LDB1-204ENST00000490751 MTF2Q9Y483 593 aaPredicted RBP33.6■■■□□ 2.97
LDB1-204ENST00000490751 OBSL1O75147 1896 aa33.59■■■□□ 2.97
LDB1-204ENST00000490751 ZNF263O14978 683 aa33.59■■■□□ 2.97
LDB1-204ENST00000490751 HMGA1P17096 107 aaKnown RBP33.59■■■□□ 2.97
LDB1-204ENST00000490751 WARSP23381 471 aaKnown RBP33.59■■■□□ 2.97
LDB1-204ENST00000490751 LMO2P25791 158 aa33.59■■■□□ 2.97
LDB1-204ENST00000490751 RPL10AP62906 217 aaKnown RBP33.59■■■□□ 2.97
LDB1-204ENST00000490751 SLC9A9Q8IVB4 645 aa33.59■■■□□ 2.97
LDB1-204ENST00000490751 TASP1Q9H6P5 420 aa33.59■■■□□ 2.97
LDB1-204ENST00000490751 CDH9Q9ULB4 789 aa33.59■■■□□ 2.97
LDB1-204ENST00000490751 FAM170BA6NMN3 283 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 PDXKO00764 312 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 ATP2C2O75185 946 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 PSMC1P62191 440 aaKnown RBP33.58■■■□□ 2.97
LDB1-204ENST00000490751 DPYDQ12882 1025 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 TRPC3Q13507 836 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 DDR2Q16832 855 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 CFAP221Q4G0U5 840 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 FAM171BQ6P995 826 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 OSBPL6Q9BZF3 934 aa33.58■■■□□ 2.97
LDB1-204ENST00000490751 RHOBTB3O94955 611 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 ZNF202O95125 648 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 NR3C1P04150 777 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 CSH1P0DML2 217 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 CSH2P0DML3 217 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 ZNF852Q6ZMS4 543 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 YAF2Q8IY57 180 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 PARD3BQ8TEW8 1205 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 TMEM174Q8WUU8 243 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 FUBP3Q96I24 572 aaKnown RBP eCLIP33.57■■■□□ 2.96
LDB1-204ENST00000490751 MRPL45Q9BRJ2 306 aaKnown RBP33.57■■■□□ 2.96
LDB1-204ENST00000490751 TRPV5Q9NQA5 729 aa33.57■■■□□ 2.96
LDB1-204ENST00000490751 MAGED2Q9UNF1 606 aaPredicted RBP33.57■■■□□ 2.96
LDB1-204ENST00000490751 LRRIQ3A6PVS8 624 aaPredicted RBP33.56■■■□□ 2.96
LDB1-204ENST00000490751 DPYSL4O14531 572 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 PHACTR2O75167 634 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 PDGFRBP09619 1106 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 TARSP26639 723 aaKnown RBP33.56■■■□□ 2.96
LDB1-204ENST00000490751 NBL1P41271 181 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 NLRP12P59046 1061 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 MYL6P60660 151 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 TNNC1P63316 161 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 WDR72Q3MJ13 1102 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 C4orf50Q6ZRC1 276 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 TMEM150AQ86TG1 271 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 BCO2Q9BYV7 579 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 CRTAC1Q9NQ79 661 aa33.56■■■□□ 2.96
LDB1-204ENST00000490751 SHISA7A6NL88 538 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 PRAMEF12O95522 483 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 STAU1O95793 577 aaKnown RBP33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms