RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ZBP1Q9H171 429 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 NKX2-4Q9H2Z4 354 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 NHEJ1Q9H9Q4 299 aaPredicted RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 SLC28A3Q9HAS3 691 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 LUC7LQ9NQ29 371 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 ARHGAP20Q9P2F6 1191 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 HESX1Q9UBX0 185 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 NOCTQ9UK39 431 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 O00370 1275 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 AKR1B10O60218 316 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 TBC1D4O60343 1298 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 SETSIPP0DME0 302 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 SKILP12757 684 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 MYOGP15173 224 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 BRD2P25440 801 aaKnown RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 EIF4A3P38919 411 aaKnown RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 SMC1AQ14683 1233 aaKnown RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 C10orf76Q5T2E6 689 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 KIAA0319Q5VV43 1072 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 SLC8B1Q6J4K2 584 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 FAM171BQ6P995 826 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 LCLAT1Q6UWP7 414 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 TAS1R1Q7RTX1 841 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 ZNF571Q7Z3V5 609 aaPredicted RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 TXLNBQ8N3L3 684 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 LNX1Q8TBB1 728 aaPredicted RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 DDX1Q92499 740 aaKnown RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 CYFIP2Q96F07 1278 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX12-205ENST00000490561 NOX5Q96PH1 765 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 HNRNPABQ99729 332 aaKnown RBP14.06□□□□□ -0.16
SNX12-205ENST00000490561 SYT11Q9BT88 431 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 ZNF518BQ9C0D4 1074 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 LHX5Q9H2C1 402 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 DPEP3Q9H4B8 488 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 MAFFQ9ULX9 164 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX12-205ENST00000490561 IRAK3Q9Y616 596 aa14.06□□□□□ -0.16
SNX12-205ENST00000490561 H3BNC9 293 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 C1RP00736 705 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 GZMAP12544 262 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 DNAJB2P25686 324 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 PBX2P40425 430 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 NDUFV1P49821 464 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 BCAT1P54687 386 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 SNX16P57768 344 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 PSMC1P62191 440 aaKnown RBP14.05□□□□□ -0.16
SNX12-205ENST00000490561 FMO1Q01740 532 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 GPR17Q13304 367 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 ORC1Q13415 861 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 GPM6BQ13491 265 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 SPA17Q15506 151 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 PTPN14Q15678 1187 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 SLC18A3Q16572 532 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 MDH1BQ5I0G3 518 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 TAF3Q5VWG9 929 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 TPGS2Q68CL5 300 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
SNX12-205ENST00000490561 TMEM139Q8IV31 216 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 ANKRD52Q8NB46 1076 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 TMEM35BQ8NCS4 154 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 MSANTD4Q8NCY6 345 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 OR10T2Q8NGX3 314 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 SPPL3Q8TCT6 385 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 POF1BQ8WVV4 589 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 TIFAQ96CG3 184 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 CHP1Q99653 195 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 MED10Q9BTT4 135 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX12-205ENST00000490561 EMILIN2Q9BXX0 1053 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 RXFP1Q9HBX9 757 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 ABCB6Q9NP58 842 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 CRTAC1Q9NQ79 661 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 TLR9Q9NR96 1032 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 SEPT11Q9NVA2 429 aaKnown RBP14.05□□□□□ -0.16
SNX12-205ENST00000490561 NME7Q9Y5B8 376 aa14.05□□□□□ -0.16
SNX12-205ENST00000490561 NLRC5Q86WI3 1866 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 TMEM265A0A087WTH1 108 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 MYBPHLA2RUH7 354 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 EIF3CLB5ME19 914 aaKnown RBP14.04□□□□□ -0.16
SNX12-205ENST00000490561 MMEP08473 750 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 CPB1P15086 417 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 CHRNB2P17787 502 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 KIF11P52732 1056 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 KRT83P78385 493 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 CCZ1BP86790 482 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 CCZ1P86791 482 aaPredicted RBP14.04□□□□□ -0.16
SNX12-205ENST00000490561 GOLGA7BQ2TAP0 167 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 ASTE1Q2TB18 679 aaPredicted RBP14.04□□□□□ -0.16
SNX12-205ENST00000490561 PPP1R26Q5T8A7 1209 aaPredicted RBP14.04□□□□□ -0.16
SNX12-205ENST00000490561 PRSS55Q6UWB4 352 aaPredicted RBP14.04□□□□□ -0.16
SNX12-205ENST00000490561 TMC7Q7Z402 723 aa14.04□□□□□ -0.16
SNX12-205ENST00000490561 C12orf29Q8N999 325 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms