RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 CLSTN1O94985 981 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 CMA1P23946 247 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 CDC25CP30307 473 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 SNRPFP62306 86 aaKnown RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 PSMD6Q15008 389 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 SOWAHAQ2M3V2 549 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 SDHAF4Q5VUM1 108 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 ARID3BQ8IVW6 561 aaPredicted RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 YAF2Q8IY57 180 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 IRF7Q92985 503 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 PKMYT1Q99640 499 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 ACBD6Q9BR61 282 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 SPATA6Q9NWH7 488 aaPredicted RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 GTF3C4Q9UKN8 822 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 MAGED2Q9UNF1 606 aaPredicted RBP11.11□□□□□ -0.63
RBM39-236ENST00000490484 HPSEQ9Y251 543 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 PIAS3Q9Y6X2 628 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 ARNTLO00327 626 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 GABRDO14764 452 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 CYP2F1P24903 491 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 PCSK1P29120 753 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 SYKP43405 635 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 LHX1P48742 406 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 CASP4P49662 377 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 NDUFA8P51970 172 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 STK4Q13043 487 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 DDR2Q16832 855 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 ZNF852Q6ZMS4 543 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 ASCL5Q7RTU5 278 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 TRAPPC11Q7Z392 1133 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 SPATA2LQ8IUW3 424 aaPredicted RBP11.1□□□□□ -0.63
RBM39-236ENST00000490484 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 MFSD6LQ8IWD5 586 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 GOLGA5Q8TBA6 731 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 SPATA18Q8TC71 538 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 KBTBD7Q8WVZ9 684 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 NKD2Q969F2 451 aaPredicted RBP11.1□□□□□ -0.63
RBM39-236ENST00000490484 MYLPFQ96A32 169 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 E2F7Q96AV8 911 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 MMS19Q96T76 1030 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
RBM39-236ENST00000490484 ABCB6Q9NP58 842 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 CGNQ9P2M7 1197 aaKnown RBP11.1□□□□□ -0.63
RBM39-236ENST00000490484 USP25Q9UHP3 1055 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 NDRG2Q9UN36 371 aaKnown RBP11.1□□□□□ -0.63
RBM39-236ENST00000490484 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 OBSL1O75147 1896 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
RBM39-236ENST00000490484 FRYLO94915 3013 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 MYBPHLA2RUH7 354 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 SLC38A8A6NNN8 435 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 DPYSL4O14531 572 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 ATP2C2O75185 946 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 HMGA1P17096 107 aaKnown RBP11.09□□□□□ -0.63
RBM39-236ENST00000490484 LMO2P25791 158 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 NLRP12P59046 1061 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 RPL10AP62906 217 aaKnown RBP11.09□□□□□ -0.63
RBM39-236ENST00000490484 TNNC1P63316 161 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 FCHO2Q0JRZ9 810 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 BIRC3Q13489 604 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 CFAP221Q4G0U5 840 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 TMEM150AQ86TG1 271 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 SCN4BQ8IWT1 228 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 CSGALNACT1Q8TDX6 532 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 FAM3CQ92520 227 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 ZFYVE19Q96K21 471 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 LRRC3BQ96PB8 259 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 MRPL45Q9BRJ2 306 aaKnown RBP11.09□□□□□ -0.63
RBM39-236ENST00000490484 OSBPL6Q9BZF3 934 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 GZF1Q9H116 711 aaPredicted RBP11.09□□□□□ -0.63
RBM39-236ENST00000490484 TASP1Q9H6P5 420 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 MRPS17Q9Y2R5 130 aaKnown RBP11.09□□□□□ -0.63
RBM39-236ENST00000490484 R4GN57 208 aa11.09□□□□□ -0.63
RBM39-236ENST00000490484 F5P12259 2224 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 MAN2B1O00754 1011 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 CHADO15335 359 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 NCAM2O15394 837 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 LAMTOR5O43504 91 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 TADA3O75528 432 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 RPN1P04843 607 aaKnown RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 MYL1P05976 194 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 PDGFRBP09619 1106 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms