RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 H0Y858 1186 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 GABRDO14764 452 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 PI15O43692 258 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 RHOBTB3O94955 611 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 NR3C1P04150 777 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 PRR29P0C7W0 189 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 CSH1P0DML2 217 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 CSH2P0DML3 217 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
SEC13-218ENST00000490283 ATICP31939 592 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 STARD6P59095 220 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 DPYDQ12882 1025 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 GPR158Q5T848 1215 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 DTWD2Q8NBA8 298 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 FUBP3Q96I24 572 aaKnown RBP eCLIP18.69■□□□□ 0.58
SEC13-218ENST00000490283 SYT15Q9BQS2 421 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 KCTD10Q9H3F6 313 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 GOLPH3LQ9H4A5 285 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 ZNF334Q9HCZ1 680 aaPredicted RBP18.69■□□□□ 0.58
SEC13-218ENST00000490283 TMLHEQ9NVH6 421 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 ZMYM5Q9UJ78 669 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 GTF3C4Q9UKN8 822 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 ZNF263O14978 683 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 WARSP23381 471 aaKnown RBP18.68■□□□□ 0.58
SEC13-218ENST00000490283 GDI1P31150 447 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 VIPR2P41587 438 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 UBXN2BQ14CS0 331 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 WDR72Q3MJ13 1102 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 SCARA3Q6AZY7 606 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 TPRG1Q6ZUI0 275 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 GAREM2Q75VX8 874 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 ALYREFQ86V81 257 aaKnown RBP18.68■□□□□ 0.58
SEC13-218ENST00000490283 OSTM1Q86WC4 334 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 MFSD6LQ8IWD5 586 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 PJA1Q8NG27 643 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 TMEM174Q8WUU8 243 aa18.68■□□□□ 0.58
SEC13-218ENST00000490283 UXTQ9UBK9 157 aaPredicted RBP18.68■□□□□ 0.58
SEC13-218ENST00000490283 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
SEC13-218ENST00000490283 MRPS17Q9Y2R5 130 aaKnown RBP18.68■□□□□ 0.58
SEC13-218ENST00000490283 HEPACAM2A8MVW5 462 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 NRG2O14511 850 aaPredicted RBP18.67■□□□□ 0.58
SEC13-218ENST00000490283 STAU1O95793 577 aaKnown RBP18.67■□□□□ 0.58
SEC13-218ENST00000490283 CST3P01034 146 aaPredicted RBP18.67■□□□□ 0.58
SEC13-218ENST00000490283 FAM163BP0C2L3 166 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 KCNB1Q14721 858 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 CFAP221Q4G0U5 840 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 POTEHQ6S545 545 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 VITQ6UXI7 678 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 ZNF852Q6ZMS4 543 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 SCN4BQ8IWT1 228 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 OR6B3Q8NGW1 331 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 KBTBD7Q8WVZ9 684 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 FOXQ1Q9C009 403 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 TASP1Q9H6P5 420 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 DMAC2Q9NW81 257 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 RMND1Q9NWS8 449 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 MAGEC2Q9UBF1 373 aaPredicted RBP18.67■□□□□ 0.58
SEC13-218ENST00000490283 NXF1Q9UBU9 619 aaKnown RBP18.67■□□□□ 0.58
SEC13-218ENST00000490283 HOOK1Q9UJC3 728 aaKnown RBP18.67■□□□□ 0.58
SEC13-218ENST00000490283 TRAF3IP3Q9Y228 551 aa18.67■□□□□ 0.58
SEC13-218ENST00000490283 LRRIQ3A6PVS8 624 aaPredicted RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 NCAM2O15394 837 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 TACC1O75410 805 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 DCNP07585 359 aaKnown RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 PDGFRBP09619 1106 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 P4HA1P13674 534 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 CYP2F1P24903 491 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 RPL13P26373 211 aaKnown RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 CASP4P49662 377 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 MRE11P49959 708 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 MYL6P60660 151 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 PSMC1P62191 440 aaKnown RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 CYP4F8P98187 520 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 DDR2Q16832 855 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 ZNF699Q32M78 642 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 STXBP5Q5T5C0 1151 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 LIMS2Q7Z4I7 341 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 ARID3BQ8IVW6 561 aaPredicted RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 GUF1Q8N442 669 aaKnown RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 ZNF516Q92618 1163 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 MRPS31Q92665 395 aaKnown RBP18.66■□□□□ 0.58
SEC13-218ENST00000490283 NELL2Q99435 816 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 PKMYT1Q99640 499 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 BCO2Q9BYV7 579 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 OSBPL6Q9BZF3 934 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 HEBP1Q9NRV9 189 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 FAM86C1Q9NVL1 165 aa18.66■□□□□ 0.58
SEC13-218ENST00000490283 MYBPHLA2RUH7 354 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 MAN2B1O00754 1011 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 KRT13P13646 458 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 NR2F2P24468 414 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 LMO2P25791 158 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 DDX6P26196 483 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■□□□□ 8.8
SEC13-218ENST00000490283 ANXA13P27216 316 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 AVPR1AP37288 418 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 GPR15P49685 360 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms