RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, human

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPA4-208	ENST00000490117	ZNF263	O14978	683 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	AKR1B10	O60218	316 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	MICAL2	O94851	1124 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	CYP11A1	P05108	521 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	FAM228B	P0C875	321 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PTPN1	P18031	435 aa	Known RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TYMP	P19971	482 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TNFAIP3	P21580	790 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	FECH	P22830	423 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	DNAJB1	P25685	340 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	HNRNPH3	P31942	346 aa	Known RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PRKCI	P41743	596 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	GLUD2	P49448	558 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	KIF11	P52732	1056 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	CYP27A1	Q02318	531 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TAP1	Q03518	808 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	YWHAH	Q04917	246 aa	Predicted RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	GFPT1	Q06210	699 aa	Predicted RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PSMD5	Q16401	504 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	CTXN3	Q4LDR2	81 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	INTS6L	Q5JSJ4	861 aa	Known RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PLPP4	Q5VZY2	271 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	ZNF280D	Q6N043	979 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	CYP26C1	Q6V0L0	522 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PHLDB2	Q86SQ0	1253 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	LRRTM3	Q86VH5	581 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	RNF168	Q8IYW5	571 aa	Predicted RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TDH	Q8IZJ6	230 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TMEM86A	Q8N2M4	240 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TTC9B	Q8N6N2	239 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	B3GALNT2	Q8NCR0	500 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	C1orf131	Q8NDD1	294 aa	Known RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	STKLD1	Q8NE28	680 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	UBA3	Q8TBC4	463 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	SLC2A14	Q8TDB8	520 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	GDPD5	Q8WTR4	605 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	ZNF606	Q8WXB4	792 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	SYN2	Q92777	582 aa	Predicted RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	SYT11	Q9BT88	431 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	MED10	Q9BTT4	135 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	B3GNT5	Q9BYG0	378 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	NUCKS1	Q9H1E3	243 aa	Known RBP	7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PDCL3	Q9H2J4	239 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	AAAS	Q9NRG9	546 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TAS2R14	Q9NYV8	317 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	TJP2	Q9UDY2	1190 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	GTF3C4	Q9UKN8	822 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	PCDHA11	Q9Y5I1	949 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	MYO7A	Q13402	2215 aa		7.91	□□□□□ -1.14
CPA4-208	ENST00000490117	HELZ	P42694	1942 aa	Known RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	EPOP	A6NHQ4	379 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	RFXAP	O00287	272 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117		O00370	1275 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	SYN3	O14994	580 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	GRM6	O15303	877 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	ATMIN	O43313	823 aa	Predicted RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	TRAPPC3	O43617	180 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	SOAT2	O75908	522 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	EFEMP2	O95967	443 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	SOD2	P04179	222 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	UROD	P06132	367 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	PAEP	P09466	180 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	VDR	P11473	427 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	CPB1	P15086	417 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	IRS1	P35568	1242 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	PPM1A	P35813	382 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	BMPR1A	P36894	532 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	LHX1	P48742	406 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	GPR15	P49685	360 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	RGS7	P49802	495 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	CACNA2D1	P54289	1103 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	CDR2	Q01850	454 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	MLLT1	Q03111	559 aa	Predicted RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	ELAVL2	Q12926	359 aa	Known RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	USP41	Q3LFD5	358 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	SLC39A12	Q504Y0	691 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	C2CD6	Q53TS8	623 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	SGO2	Q562F6	1265 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	NAA35	Q5VZE5	725 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	PPP2R2D	Q66LE6	453 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	KIAA1841	Q6NSI8	718 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	LLGL2	Q6P1M3	1020 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	PAQR9	Q6ZVX9	377 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	FAM35A	Q86V20	835 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	UNC93A	Q86WB7	457 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	TTC30A	Q86WT1	665 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	TMTC1	Q8IUR5	882 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	VPS52	Q8N1B4	723 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	THEM5	Q8N1Q8	247 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	PLCD3	Q8N3E9	789 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	CCDC112	Q8NEF3	446 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	SLC30A5	Q8TAD4	765 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	POF1B	Q8WVV4	589 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	ARNTL2	Q8WYA1	636 aa		7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	CLP1	Q92989	425 aa	Known RBP	7.9	□□□□□ -1.14
CPA4-208	ENST00000490117	TRIM44	Q96DX7	344 aa	Predicted RBP	7.9	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms