RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 JRKLQ9Y4A0 524 aa10.62□□□□□ -0.71
USP11-211ENST00000489111 PCDHGC5Q9Y5F6 944 aa10.62□□□□□ -0.71
USP11-211ENST00000489111 TIMM13Q9Y5L4 95 aaPredicted RBP10.62□□□□□ -0.71
USP11-211ENST00000489111 ANK1P16157 1881 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 M0QZQ0 153 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 GABRDO14764 452 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 HCRTO43612 131 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 B4GALT3O60512 393 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 TADA2AO75478 443 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 FTCDO95954 541 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 SETSIPP0DME0 302 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 CCDC130P13994 396 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 PTPN1P18031 435 aaKnown RBP10.61□□□□□ -0.71
USP11-211ENST00000489111 TYMPP19971 482 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 IGFBP6P24592 240 aaPredicted RBP10.61□□□□□ -0.71
USP11-211ENST00000489111 ACAT1P24752 427 aaKnown RBP10.61□□□□□ -0.71
USP11-211ENST00000489111 LMO2P25791 158 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 ITGB8P26012 769 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 ADORA2BP29275 332 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 BCAT1P54687 386 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 SNX16P57768 344 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 PDCLQ13371 301 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 TCEAL1Q15170 157 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 MDH1BQ5I0G3 518 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 OVOS1Q6IE37 1185 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 DNAJC24Q6P3W2 148 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP11-211ENST00000489111 DAAM2Q86T65 1068 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 C7orf61Q8IZ16 206 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 THEM5Q8N1Q8 247 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 C12orf29Q8N999 325 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 TMEM175Q9BSA9 504 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 MED10Q9BTT4 135 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 COLEC11Q9BWP8 271 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 MRPL47Q9HD33 250 aaKnown RBP10.61□□□□□ -0.71
USP11-211ENST00000489111 OSGEPQ9NPF4 335 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 IL23AQ9NPF7 189 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 ST7Q9NRC1 585 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 DNAJB4Q9UDY4 337 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 CDH9Q9ULB4 789 aa10.61□□□□□ -0.71
USP11-211ENST00000489111 SF3B1O75533 1304 aaKnown RBP eCLIP10.6□□□□□ -0.71
USP11-211ENST00000489111 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 ZBBXA8MT70 800 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 F8W810 466 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 ENC1O14682 589 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 BUB1BO60566 1050 aaPredicted RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 CAPN15O75808 1086 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 MTA2O94776 668 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 ATP1A1P05023 1023 aaKnown RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 CYP11A1P05108 521 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 ITGB1P05556 798 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 ACRP10323 421 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 RRM1P23921 792 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 SLC11A1P49279 550 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 HADHBP55084 474 aaKnown RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 WDR5P61964 334 aaKnown RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 TSPY1Q01534 308 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 FPGSQ05932 587 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 BST2Q10589 180 aaKnown RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 ELAVL2Q12926 359 aaKnown RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 TUBB2AQ13885 445 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 C2CD6Q53TS8 623 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 PPP1R26Q5T8A7 1209 aaPredicted RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 C11orf63Q6NUN7 778 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 PEX26Q7Z412 305 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 CRIPAKQ8N1N5 446 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 UBA3Q8TBC4 463 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 SLC2A14Q8TDB8 520 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 TUBB2BQ9BVA1 445 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 NRDE2Q9H7Z3 1164 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 PARVAQ9NVD7 372 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 CHORDC1Q9UHD1 332 aaPredicted RBP10.6□□□□□ -0.71
USP11-211ENST00000489111 ADAM28Q9UKQ2 775 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 FAN1Q9Y2M0 1017 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 NME7Q9Y5B8 376 aa10.6□□□□□ -0.71
USP11-211ENST00000489111 CITO14578 2027 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 GOLGA8SH3BPF8 625 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 NRP1O14786 923 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 SYN3O14994 580 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 FANCGO15287 622 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 DGKIO75912 1065 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 ALDH2P05091 517 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 FAM200BP0CF97 657 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 GPD2P43304 727 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 BCAR1P56945 870 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 TAP1Q03518 808 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 YWHAHQ04917 246 aaPredicted RBP10.59□□□□□ -0.71
USP11-211ENST00000489111 PTP4A2Q12974 167 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 MAPRE1Q15691 268 aaKnown RBP10.59□□□□□ -0.71
USP11-211ENST00000489111 PTPN20Q4JDL3 420 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 SPOUT1Q5T280 376 aaKnown RBP10.59□□□□□ -0.71
USP11-211ENST00000489111 CYP4A22Q5TCH4 519 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 FAM117BQ6P1L5 589 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 DCUN1D2Q6PH85 259 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 CD300LGQ6UXG3 332 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 TTC30AQ86WT1 665 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms