RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SLITRK3O94933 977 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 PRAMEF1O95521 474 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 DARSP14868 501 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 RPA1P27694 616 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 TECP42680 631 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 SARSP49591 514 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 RARRES1P49788 294 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 TAP1Q03518 808 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 POU5F1BQ06416 359 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 CTTNQ14247 550 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 EMC2Q15006 297 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 ZNF174Q15697 407 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 PTPROQ16827 1216 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 KRT79Q5XKE5 535 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 PLA2G4FQ68DD2 849 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 SLC24A5Q71RS6 500 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 SRGAP1Q7Z6B7 1085 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 RHPN2Q8IUC4 686 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 CMTR2Q8IYT2 770 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 LRRC71Q8N4P6 559 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 FIBCD1Q8N539 461 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 RBBP8NLQ8NC74 664 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 MCPH1Q8NEM0 835 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 MAFAQ8NHW3 353 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 SNX21Q969T3 373 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 ZBTB10Q96DT7 871 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 AK8Q96MA6 479 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 NLRP4Q96MN2 994 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 HSD17B14Q9BPX1 270 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 NT5C3AQ9H0P0 336 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 NSUN3Q9H649 340 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 ELAC1Q9H777 363 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 AGO3Q9H9G7 860 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 ERVK-5Q9HDB9 667 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 RGS18Q9NS28 235 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 CHST7Q9NS84 486 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 SUCLA2Q9P2R7 463 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 LRWD1Q9UFC0 647 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 KCNG1Q9UIX4 513 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 DBR1Q9UK59 544 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 ST3GAL5Q9UNP4 418 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 YBX2Q9Y2T7 364 aaKnown RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 PCDHB7Q9Y5E2 793 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 COL4A3BPQ9Y5P4 624 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 PHLPP2Q6ZVD8 1323 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 CDH23Q9H251 3354 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 KIAA1671Q9BY89 1806 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 A0A087WZ62 844 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 LINC01553A4QN01 128 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 VPS37CA5D8V6 355 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 DTNBO60941 627 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 ERLIN2O94905 339 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 STBD1O95210 358 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 RB1P06400 928 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 SYPP08247 313 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 GUCY2CP25092 1073 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 AXLP30530 894 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 KIR2DL1P43626 348 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 KIR2DL2P43627 348 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 RAB27AP51159 221 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 PMS1P54277 932 aaKnown RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 ERVFC1P60507 584 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 ERVK-21P61565 698 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 ATP2C1P98194 919 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 AUHQ13825 339 aaKnown RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 BTG3Q14201 252 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 PPP2R5AQ15172 486 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 SLC14A2Q15849 920 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 NAALADL2Q58DX5 795 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 PRR23BQ6ZRT6 265 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 TMC3Q7Z5M5 1100 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 FAM228AQ86W67 206 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 CATSPER3Q86XQ3 398 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 IRF2BP1Q8IU81 584 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 TMEM192Q8IY95 271 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 HACE1Q8IYU2 909 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 IGSF22Q8N9C0 903 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 OR6P1Q8NGX9 317 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 ARNTL2Q8WYA1 636 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 P2RX5Q93086 422 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 PPP2R3CQ969Q6 453 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 CDK5RAP3Q96JB5 506 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 DIRC2Q96SL1 478 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 CEP89Q96ST8 783 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 ADAM2Q99965 735 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 FDXACB1Q9BRP7 624 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 MRPL9Q9BYD2 267 aaKnown RBP5.65□□□□□ -1.5
SF3A3-207ENST00000488934 NFKBIZQ9BYH8 718 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 FOXP3Q9BZS1 431 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 PRDM14Q9GZV8 571 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 TMEM60Q9H2L4 133 aa5.65□□□□□ -1.5
SF3A3-207ENST00000488934 PRDM12Q9H4Q4 367 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms