RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DPYSL4O14531 572 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 GABRDO14764 452 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 NCAM2O15394 837 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 ATP2C2O75185 946 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 HMGA1P17096 107 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 TNNI1P19237 187 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 CDC25CP30307 473 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 LHX1P48742 406 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 MYL7Q01449 175 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 CYP24A1Q07973 514 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 FZD5Q13467 585 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 DDR2Q16832 855 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 INTS6LQ5JSJ4 861 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 HS2ST1Q7LGA3 356 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 TRAPPC11Q7Z392 1133 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 WDR49Q8IV35 697 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 XXYLT1Q8NBI6 393 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 LEO1Q8WVC0 666 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 FAM3CQ92520 227 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 CLDN23Q96B33 292 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 GCNAQ96QF7 691 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 PKMYT1Q99640 499 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 SLC46A2Q9BY10 475 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 SMG9Q9H0W8 520 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 MAGED2Q9UNF1 606 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 PIAS3Q9Y6X2 628 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 MYH15Q9Y2K3 1946 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 MYBPHLA2RUH7 354 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ARNTLO00327 626 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 CHADO15335 359 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 LAMTOR5O43504 91 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ACTN4O43707 911 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 CST3P01034 146 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 PDGFRBP09619 1106 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 PFKFB1P16118 471 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 CMA1P23946 247 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 CCNE1P24864 410 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 LMO2P25791 158 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 PCSK1P29120 753 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 NLRP12P59046 1061 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 SNRPFP62306 86 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 PSMD6Q15008 389 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 KNOP1Q1ED39 458 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 BMT2Q1RMZ1 405 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 TMEM150AQ86TG1 271 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 SPATA2LQ8IUW3 424 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ADSSL1Q8N142 457 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ZNF687Q8N1G0 1237 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 CSGALNACT1Q8TDX6 532 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 KBTBD7Q8WVZ9 684 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ZFYVE19Q96K21 471 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 SPATA32Q96LK8 384 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 FNBP1Q96RU3 617 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 MMS19Q96T76 1030 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ABCB6Q9NP58 842 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 UBE4BO95155 1302 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 ANK1P16157 1881 aa12.8□□□□□ -0.36
CCHCR1-215ENST00000488920 DMDP11532 3685 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 SLC38A8A6NNN8 435 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 KLRC4O43908 158 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 EXOC3O60645 756 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 F11P03951 625 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 MAGEA9P43362 315 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 RPS9P46781 194 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 SOX9P48436 509 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 KPNA1P52294 538 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 PSMC1P62191 440 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 FCHO2Q0JRZ9 810 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 STK4Q13043 487 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 MTAPQ13126 283 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 TXNDC8Q6A555 127 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 DPH6Q7L8W6 267 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 LIMS2Q7Z4I7 341 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 MAB21L3Q8N8X9 362 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 LMAN1LQ9HAT1 526 aa12.79□□□□□ -0.36
CCHCR1-215ENST00000488920 LMNAP02545 664 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CSH1P0DML2 217 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CSH2P0DML3 217 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 WEE1P30291 646 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 GNL1P36915 607 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CASP4P49662 377 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 KRT85P78386 507 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 TNK2Q07912 1038 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 FAM171BQ6P995 826 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 TSSK4Q6SA08 328 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 C12orf56Q8IXR9 622 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CMTM8Q8IZV2 173 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 KIAA0895Q8NCT3 520 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms