RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ZFHX2Q9C0A1 2572 aaPredicted RBP24.79■■□□□ 1.56
CUL4A-209ENST00000488558 PRR23AA6NEV1 266 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 FAM170BA6NMN3 283 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 MAN2B1O00754 1011 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 ZNF263O14978 683 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 NCAM2O15394 837 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 KLRC4O43908 158 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 LRRN2O75325 713 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 PFKFB1P16118 471 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 RPS9P46781 194 aaKnown RBP24.79■■□□□ 1.56
CUL4A-209ENST00000488558 CYP24A1Q07973 514 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 TAF12Q16514 161 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 GPR158Q5T848 1215 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 OSTM1Q86WC4 334 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 CLDN23Q96B33 292 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 PAGE5Q96GU1 130 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 MSANTD3Q96H12 275 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 SPATA32Q96LK8 384 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 FNBP1Q96RU3 617 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 CGRRF1Q99675 332 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 TASP1Q9H6P5 420 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 MTF2Q9Y483 593 aaPredicted RBP24.79■■□□□ 1.56
CUL4A-209ENST00000488558 ATP6V1DQ9Y5K8 247 aa24.79■■□□□ 1.56
CUL4A-209ENST00000488558 FANCMQ8IYD8 2048 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 SHISA7A6NL88 538 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 ARNTLO00327 626 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 CLIC2O15247 247 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 TARSP26639 723 aaKnown RBP24.78■■□□□ 1.56
CUL4A-209ENST00000488558 CYP2J2P51589 502 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 RPL10AP62906 217 aaKnown RBP24.78■■□□□ 1.56
CUL4A-209ENST00000488558 PSMD2Q13200 908 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 CFAP221Q4G0U5 840 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 TRAPPC11Q7Z392 1133 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 ARID3BQ8IVW6 561 aaPredicted RBP24.78■■□□□ 1.56
CUL4A-209ENST00000488558 GRAMD1CQ8IYS0 662 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 TMEM174Q8WUU8 243 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 NKD2Q969F2 451 aaPredicted RBP24.78■■□□□ 1.56
CUL4A-209ENST00000488558 RSPRY1Q96DX4 576 aa24.78■■□□□ 1.56
CUL4A-209ENST00000488558 FUBP3Q96I24 572 aaKnown RBP eCLIP24.78■■□□□ 1.56
CUL4A-209ENST00000488558 FAM237AA0A1B0GTK4 181 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 SOBPA7XYQ1 873 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 CHADO15335 359 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 CSH1P0DML2 217 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 CSH2P0DML3 217 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 TNNI1P19237 187 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 CD72P21854 359 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 ACAT1P24752 427 aaKnown RBP24.77■■□□□ 1.56
CUL4A-209ENST00000488558 YAF2Q8IY57 180 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 RDH13Q8NBN7 331 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 GIPC2Q8TF65 315 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 KBTBD7Q8WVZ9 684 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 PI4K2AQ9BTU6 479 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 SEMA4AQ9H3S1 761 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 EXOC1Q9NV70 894 aa24.77■■□□□ 1.56
CUL4A-209ENST00000488558 A0A1B0GVL5 298 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 DLATP10515 647 aaKnown RBP24.76■■□□□ 1.55
CUL4A-209ENST00000488558 HMGA1P17096 107 aaKnown RBP24.76■■□□□ 1.55
CUL4A-209ENST00000488558 DDX6P26196 483 aaKnown RBP eCLIP24.76■■□□□ 1.552e-6■■■■□ 20
CUL4A-209ENST00000488558 C1orf228Q6PIY5 440 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 ASCL5Q7RTU5 278 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 KIAA0895Q8NCT3 520 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 TRMT2BQ96GJ1 504 aaKnown RBP24.76■■□□□ 1.55
CUL4A-209ENST00000488558 SCAND2PQ9GZW5 306 aaPredicted RBP24.76■■□□□ 1.55
CUL4A-209ENST00000488558 GTF3C4Q9UKN8 822 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 FBXO4Q9UKT5 387 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 PIAS3Q9Y6X2 628 aa24.76■■□□□ 1.55
CUL4A-209ENST00000488558 PTPRDP23468 1912 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.75■■□□□ 1.55
CUL4A-209ENST00000488558 STAU1O95793 577 aaKnown RBP24.75■■□□□ 1.55
CUL4A-209ENST00000488558 FAM163BP0C2L3 166 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 WARSP23381 471 aaKnown RBP24.75■■□□□ 1.55
CUL4A-209ENST00000488558 CDR1P51861 262 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 NLRP12P59046 1061 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 CYP4F8P98187 520 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 STK4Q13043 487 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 ARHGAP29Q52LW3 1261 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 FAM171BQ6P995 826 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 ZC3H14Q6PJT7 736 aaKnown RBP24.75■■□□□ 1.55
CUL4A-209ENST00000488558 ZNF687Q8N1G0 1237 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 CCDC127Q96BQ5 260 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 IER2Q9BTL4 223 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 GZF1Q9H116 711 aaPredicted RBP24.75■■□□□ 1.55
CUL4A-209ENST00000488558 UXTQ9UBK9 157 aaPredicted RBP24.75■■□□□ 1.55
CUL4A-209ENST00000488558 CDH9Q9ULB4 789 aa24.75■■□□□ 1.55
CUL4A-209ENST00000488558 DPYSL4O14531 572 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 EXOC3O60645 756 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 NOL4O94818 638 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 PRAMEF12O95522 483 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 F11P03951 625 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 SP9P0CG40 484 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 MAGEA11P43364 429 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 FZD5Q13467 585 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 MAPRE1Q15691 268 aaKnown RBP24.74■■□□□ 1.55
CUL4A-209ENST00000488558 ZNF528Q3MIS6 628 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 KMT5BQ4FZB7 885 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 C4orf50Q6ZRC1 276 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 TMEM150AQ86TG1 271 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 SPATA2LQ8IUW3 424 aaPredicted RBP24.74■■□□□ 1.55
CUL4A-209ENST00000488558 SLC9A9Q8IVB4 645 aa24.74■■□□□ 1.55
CUL4A-209ENST00000488558 MAML2Q8IZL2 1156 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms