RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 LRRC32Q14392 662 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 DDR2Q16832 855 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 INTS6LQ5JSJ4 861 aaKnown RBP13.36□□□□□ -0.27
SREBF1-215ENST00000487401 TSSK4Q6SA08 328 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 UNC13DQ70J99 1090 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 SPATA2LQ8IUW3 424 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-215ENST00000487401 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 CELF5Q8N6W0 485 aaKnown RBP13.36□□□□□ -0.27
SREBF1-215ENST00000487401 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 BPIFB1Q8TDL5 484 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-215ENST00000487401 RUBCNQ92622 972 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 MRPS31Q92665 395 aaKnown RBP13.36□□□□□ -0.27
SREBF1-215ENST00000487401 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 LRRC3BQ96PB8 259 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 FNBP1Q96RU3 617 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 SLC46A2Q9BY10 475 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 ABCB6Q9NP58 842 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 GTF3C4Q9UKN8 822 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 NCANO14594 1321 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 PRAMEF12O95522 483 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 F11P03951 625 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 CHRNB1P11230 501 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 CYP2F1P24903 491 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 AFMP43652 599 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SOX9P48436 509 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 GPR15P49685 360 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 CYP2J2P51589 502 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 CCR3P51677 355 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 NLRP12P59046 1061 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SNRNP35Q16560 246 aaKnown RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SOWAHAQ2M3V2 549 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SDHAF4Q5VUM1 108 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 MAMSTRQ6ZN01 415 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 DPH6Q7L8W6 267 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SCN4BQ8IWT1 228 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 NELFCDQ8IXH7 590 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 CMTM8Q8IZV2 173 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 MAB21L3Q8N8X9 362 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 FAM126AQ9BYI3 521 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 SMG9Q9H0W8 520 aaKnown RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 BLZF1Q9H2G9 400 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 PRMT8Q9NR22 394 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 AGPAT3Q9NRZ7 376 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 UXTQ9UBK9 157 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 PCDHA7Q9UN72 937 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 UBE4BO95155 1302 aa13.35□□□□□ -0.27
SREBF1-215ENST00000487401 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
SREBF1-215ENST00000487401 PVALEFA0A1B0GWK0 134 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 MYBPHLA2RUH7 354 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 GABRDO14764 452 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 CLIC2O15247 247 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 TNNI1P19237 187 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 ID4P47928 161 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 CXCL12P48061 93 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 ITPRIPL2Q3MIP1 535 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 DGKKQ5KSL6 1271 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 RESP18Q5W5W9 173 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 CC2D1AQ6P1N0 951 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-215ENST00000487401 C4orf50Q6ZRC1 276 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 TRAPPC11Q7Z392 1133 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 MON1AQ86VX9 555 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 KIAA2013Q8IYS2 634 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 ZBTB44Q8NCP5 570 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
SREBF1-215ENST00000487401 CCDC127Q96BQ5 260 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 GKN1Q9NS71 199 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 GTSE1Q9NYZ3 720 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
SREBF1-215ENST00000487401 NCDNQ9UBB6 729 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-215ENST00000487401 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
SREBF1-215ENST00000487401 NOL4O94818 638 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 CASP1P29466 404 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 CTHP32929 405 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 TNK2Q07912 1038 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms