RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 MYOCQ99972 504 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 AIFM2Q9BRQ8 373 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 APOL5Q9BWW9 433 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 PACSIN1Q9BY11 444 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 BTBD1Q9H0C5 482 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 PIH1D1Q9NWS0 290 aaKnown RBP4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 SLC17A6Q9P2U8 582 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 LRIT1Q9P2V4 623 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 ZDHHC8Q9ULC8 765 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 PCDHA6Q9UN73 950 aa4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 ARID4BQ4LE39 1312 aaPredicted RBP4.38□□□□□ -1.71
SNRNP27-204ENST00000487029 TCRBV7S2A1N4TA0A589 114 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 KIAA0391O15091 583 aaKnown RBP4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 TPD52L2O43399 206 aaKnown RBP4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 SLC43A1O75387 559 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 POMCP01189 267 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 AHSGP02765 367 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 CELA2AP08217 269 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 MYL3P08590 195 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 GNAI3P08754 354 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 SBK3P0C264 359 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 KITP10721 976 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 ALAS1P13196 640 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 NPR1P16066 1061 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 RPL17P18621 184 aaKnown RBP4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 SLC7A1P30825 629 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 RAP2BP61225 183 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 GNAI1P63096 354 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 MXRA7P84157 204 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 IFIT5Q13325 482 aaKnown RBP4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 GPR162Q16538 588 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 LONRF1Q17RB8 773 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 SPDYE7PQ495Y7 208 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 CCDC93Q567U6 631 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 ATXN7L2Q5T6C5 722 aaPredicted RBP4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 EMC10Q5UCC4 262 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 MED25Q71SY5 747 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 PARD3BQ8TEW8 1205 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 GJA10Q969M2 543 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 RNF31Q96EP0 1072 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 TNIP3Q96KP6 325 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 MRGPRX1Q96LB2 322 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 TMEM74BQ9NUR3 256 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 RLIMQ9NVW2 624 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 FAM30AQ9NZY2 134 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 NOX1Q9Y5S8 564 aa4.37□□□□□ -1.71
SNRNP27-204ENST00000487029 A0A1B0GTW7 788 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 RHPN2P1A8MT19 583 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 ISM1B1AKI9 464 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 MYO1FO00160 1098 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 FOXN3O00409 490 aaPredicted RBP4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 KCNAB3O43448 404 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 HAUS5O94927 633 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 PIK3CBP42338 1070 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 HTR3AP46098 478 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 TM4SF4P48230 202 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 ALDH5A1P51649 535 aaPredicted RBP4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 SOX8P57073 446 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 CXADRP78310 365 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 MORC3Q14149 939 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 AKNAD1Q5T1N1 836 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 ZNF365Q70YC5 407 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 UBE3BQ7Z3V4 1068 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 MORC1Q86VD1 984 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 AOPEPQ8N6M6 819 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 CELF5Q8N6W0 485 aaKnown RBP4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 KBTBD7Q8WVZ9 684 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 PHKBQ93100 1093 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 SUCLG2Q96I99 432 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 TBCBQ99426 244 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 MYD88Q99836 296 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 ZNF287Q9HBT7 754 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 NLRC4Q9NPP4 1024 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 SLAMF7Q9NQ25 335 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 TBCCD1Q9NVR7 557 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 JKAMPQ9P055 326 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 CFAP97Q9P2B7 532 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 OGDHLQ9ULD0 1010 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 AATKQ6ZMQ8 1374 aa4.36□□□□□ -1.71
SNRNP27-204ENST00000487029 MANSC4A6NHS7 340 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 TBX3O15119 743 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 PRSS23O95084 383 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 LDHAP00338 332 aaKnown RBP4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 ANXA1P04083 346 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 GJB1P08034 283 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 BRAFP15056 766 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 HDCP19113 662 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 EN2P19622 333 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 SLC6A4P31645 630 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 KCNJ5P48544 419 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 EXOSC9Q06265 439 aaKnown RBP4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 KIF22Q14807 665 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 UBXN2BQ14CS0 331 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 CNGA2Q16280 664 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 SRLQ86TD4 932 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 PDSS2Q86YH6 399 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 FAM186BQ8IYM0 893 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms