RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 GPR179Q6PRD1 2367 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 DENND4CQ5VZ89 1909 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 ZNF233A6NK53 670 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 CHRNB1P11230 501 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 ACAT1P24752 427 aaKnown RBP27.61■■■□□ 2.01
HLA-F-227ENST00000485513 ID4P47928 161 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 SOX9P48436 509 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 LMBRD2Q68DH5 695 aaPredicted RBP27.61■■■□□ 2.01
HLA-F-227ENST00000485513 SHC4Q6S5L8 630 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 KIAA2013Q8IYS2 634 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 SPATA18Q8TC71 538 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 SLC46A2Q9BY10 475 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 FAM126AQ9BYI3 521 aaPredicted RBP27.61■■■□□ 2.01
HLA-F-227ENST00000485513 INTS13Q9NVM9 706 aa27.61■■■□□ 2.01
HLA-F-227ENST00000485513 EIF3DO15371 548 aaKnown RBP eCLIP27.6■■■□□ 2.01
HLA-F-227ENST00000485513 HMGA1P17096 107 aaKnown RBP27.6■■■□□ 2.01
HLA-F-227ENST00000485513 GPR15P49685 360 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 PLCB2Q00722 1185 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 PPP2R5DQ14738 602 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 SURF1Q15526 300 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 INTS6LQ5JSJ4 861 aaKnown RBP27.6■■■□□ 2.01
HLA-F-227ENST00000485513 CNNM4Q6P4Q7 775 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 CBWD2Q8IUF1 395 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 ADGRF2Q8IZF7 708 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 TOP6BLQ8N6T0 577 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 TTC8Q8TAM2 541 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 SMG9Q9H0W8 520 aaKnown RBP27.6■■■□□ 2.01
HLA-F-227ENST00000485513 ABCB6Q9NP58 842 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 GTSE1Q9NYZ3 720 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 HSPBP1Q9NZL4 362 aa27.6■■■□□ 2.01
HLA-F-227ENST00000485513 MYBPHLA2RUH7 354 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 SPECC1L-ADORA2AF8WAN1 911 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 LILRB5O75023 590 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 TNNC2P02585 160 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 F11P03951 625 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 CSH1P0DML2 217 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 CSH2P0DML3 217 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 HOXD13P35453 343 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 LHX1P48742 406 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 CCR3P51677 355 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 NLRP12P59046 1061 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 MYO1EQ12965 1108 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 LRRC32Q14392 662 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 TMEM150AQ86TG1 271 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 OSTM1Q86WC4 334 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 RALGPS2Q86X27 583 aaPredicted RBP27.59■■■□□ 2.01
HLA-F-227ENST00000485513 CMTM8Q8IZV2 173 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 DCLK2Q8N568 766 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 CELF5Q8N6W0 485 aaKnown RBP27.59■■■□□ 2.01
HLA-F-227ENST00000485513 OR5B17Q8NGF7 314 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 KIAA1586Q9HCI6 787 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 THG1LQ9NWX6 298 aaKnown RBP27.59■■■□□ 2.01
HLA-F-227ENST00000485513 GTF3C4Q9UKN8 822 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 MAGED2Q9UNF1 606 aaPredicted RBP27.59■■■□□ 2.01
HLA-F-227ENST00000485513 PTPRJQ12913 1337 aa27.59■■■□□ 2.01
HLA-F-227ENST00000485513 ZNF638Q14966 1978 aaKnown RBP27.59■■■□□ 2.01
HLA-F-227ENST00000485513 PDIA4P13667 645 aaKnown RBP27.58■■■□□ 2.01
HLA-F-227ENST00000485513 CYP2F1P24903 491 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 DDX6P26196 483 aaKnown RBP eCLIP27.58■■■□□ 2.01
HLA-F-227ENST00000485513 PCSK1P29120 753 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 CTHP32929 405 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 NRLP54845 237 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 RPL10AP62906 217 aaKnown RBP27.58■■■□□ 2.01
HLA-F-227ENST00000485513 DUOXA2Q1HG44 320 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 SOWAHAQ2M3V2 549 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 FOXD4L6Q3SYB3 417 aaPredicted RBP27.58■■■□□ 2.01
HLA-F-227ENST00000485513 FAM26FQ5R3K3 315 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 SDHAF4Q5VUM1 108 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 FOXD4L3Q6VB84 417 aaPredicted RBP27.58■■■□□ 2.01
HLA-F-227ENST00000485513 EPM2AIP1Q7L775 607 aaPredicted RBP27.58■■■□□ 2.01
HLA-F-227ENST00000485513 HSCBQ8IWL3 235 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 STKLD1Q8NE28 680 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 ZNF507Q8TCN5 953 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 PKMYT1Q99640 499 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 C7orf25Q9BPX7 421 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 MAGEF1Q9HAY2 307 aa27.58■■■□□ 2.01
HLA-F-227ENST00000485513 OBSL1O75147 1896 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 GABRDO14764 452 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 HSP90AA1P07900 732 aaKnown RBP27.57■■■□□ 2
HLA-F-227ENST00000485513 ZSCAN22P10073 491 aaPredicted RBP27.57■■■□□ 2
HLA-F-227ENST00000485513 TDGF1P13385 188 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 AVPR1AP37288 418 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 DDR2Q16832 855 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 TXNDC11Q6PKC3 985 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 MAB21L3Q8N8X9 362 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 MRPS31Q92665 395 aaKnown RBP27.57■■■□□ 2
HLA-F-227ENST00000485513 HPDLQ96IR7 371 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 EPC1Q9H2F5 836 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 RBM12Q9NTZ6 932 aaKnown RBP27.57■■■□□ 2
HLA-F-227ENST00000485513 NCDNQ9UBB6 729 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 DMXL1Q9Y485 3027 aa27.57■■■□□ 2
HLA-F-227ENST00000485513 KIF26AQ9ULI4 1882 aaPredicted RBP27.56■■■□□ 2
HLA-F-227ENST00000485513 POLR2DO15514 142 aaKnown RBP27.56■■■□□ 2
HLA-F-227ENST00000485513 FOXK2Q01167 660 aa27.56■■■□□ 2
HLA-F-227ENST00000485513 TNK2Q07912 1038 aa27.56■■■□□ 2
HLA-F-227ENST00000485513 GAS6Q14393 721 aa27.56■■■□□ 2
HLA-F-227ENST00000485513 DPH6Q7L8W6 267 aa27.56■■■□□ 2
HLA-F-227ENST00000485513 SPATA2LQ8IUW3 424 aaPredicted RBP27.56■■■□□ 2
HLA-F-227ENST00000485513 WDR49Q8IV35 697 aa27.56■■■□□ 2
HLA-F-227ENST00000485513 AGPAT3Q9NRZ7 376 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms