RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 AIPL1Q9NZN9 384 aa6.85□□□□□ -1.31
NCL-209ENST00000484328 HSFX1Q9UBD0 423 aa6.85□□□□□ -1.31
NCL-209ENST00000484328 MAFFQ9ULX9 164 aa6.85□□□□□ -1.31
NCL-209ENST00000484328 PCDHGC5Q9Y5F6 944 aa6.85□□□□□ -1.31
NCL-209ENST00000484328 CDY1Q9Y6F8 540 aa6.85□□□□□ -1.31
NCL-209ENST00000484328 MYO16Q9Y6X6 1858 aa6.85□□□□□ -1.31
NCL-209ENST00000484328 WDR27A2RRH5 827 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 MYBPHLA2RUH7 354 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 MTMR11A4FU01 709 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 LRRC53A6NM62 1247 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 RFXAPO00287 272 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 O00370 1275 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 C2CD2LO14523 706 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ATP2C2O75185 946 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ADH1AP07327 375 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 RPL17P18621 184 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 FECHP22830 423 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ACAT1P24752 427 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 CLCN1P35523 988 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 SOX5P35711 763 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PRKCIP41743 596 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 STAT1P42224 750 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 CLCN4P51793 760 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PSMC1P62191 440 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 ZBED6P86452 979 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PLCB2Q00722 1185 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 TSPY1Q01534 308 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 GPR17Q13304 367 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ORC1Q13415 861 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 RAPGEF1Q13905 1077 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ADGRE1Q14246 886 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 MAPRE1Q15691 268 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 DUSP6Q16828 381 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ARHGAP44Q17R89 818 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PKDCCQ504Y2 493 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PLPP4Q5VZY2 271 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 TPGS2Q68CL5 300 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ARHGAP17Q68EM7 881 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 LILRA6Q6PI73 481 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 TMEM270Q6UE05 265 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 CACNA2D4Q7Z3S7 1137 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 TMC7Q7Z402 723 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ADGRD2Q7Z7M1 963 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ACOT1Q86TX2 421 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 LRRTM3Q86VH5 581 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 FUKQ8N0W3 1084 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 MYCBPAPQ8TBZ2 947 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 EPS8L1Q8TE68 723 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 SLC22A17Q8WUG5 538 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 MYLPFQ96A32 169 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PCED1BQ96HM7 432 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 TMEM176AQ96HP8 235 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 FUBP3Q96I24 572 aaKnown RBP eCLIP6.84□□□□□ -1.31
NCL-209ENST00000484328 SPAG5Q96R06 1193 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 DNAJC7Q99615 494 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 ZSWIM1Q9BR11 485 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 NUCKS1Q9H1E3 243 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 PRDM12Q9H4Q4 367 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 TMLHEQ9NVH6 421 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 AFF4Q9UHB7 1163 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 NOCTQ9UK39 431 aaKnown RBP6.84□□□□□ -1.31
NCL-209ENST00000484328 FBXW11Q9UKB1 542 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 KIAA1257Q9ULG3 409 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.84□□□□□ -1.312e-28■■■■■ 27.2
NCL-209ENST00000484328 SZT2Q5T011 3432 aa6.84□□□□□ -1.31
NCL-209ENST00000484328 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.32
NCL-209ENST00000484328 CYP26A1O43174 497 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 CLASP2O75122 1294 aaKnown RBP6.83□□□□□ -1.32
NCL-209ENST00000484328 CXCL14O95715 111 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 PDGFRBP09619 1106 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 OR4Q2P0C623 313 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 VDRP11473 427 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 KRT5P13647 590 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 CCDC130P13994 396 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 CPB1P15086 417 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 ATF2P15336 505 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 CYP11B1P15538 503 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 FERP16591 822 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 PTPN1P18031 435 aaKnown RBP6.83□□□□□ -1.32
NCL-209ENST00000484328 BRD2P25440 801 aaKnown RBP6.83□□□□□ -1.32
NCL-209ENST00000484328 GNA15P30679 374 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 CASP14P31944 242 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 CDH5P33151 784 aaPredicted RBP6.83□□□□□ -1.32
NCL-209ENST00000484328 OR1D2P34982 312 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 MAGEA11P43364 429 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 BMS1Q14692 1282 aaKnown RBP6.83□□□□□ -1.32
NCL-209ENST00000484328 ZNF394Q53GI3 561 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 SGO2Q562F6 1265 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 MDH1BQ5I0G3 518 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 PPP1R26Q5T8A7 1209 aaPredicted RBP6.83□□□□□ -1.32
NCL-209ENST00000484328 HGSNATQ68CP4 663 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 RNF19BQ6ZMZ0 732 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 PAQR9Q6ZVX9 377 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 RTL10Q7L3V2 364 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 TMC6Q7Z403 805 aa6.83□□□□□ -1.32
NCL-209ENST00000484328 IRF2BP2Q7Z5L9 587 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms