RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ZBTB44Q8NCP5 570 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 DHX58Q96C10 678 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 FGFBP2Q9BYJ0 223 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 PDE11AQ9HCR9 933 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 INTS13Q9NVM9 706 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 ZSCAN32Q9NX65 697 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 DDX43Q9NXZ2 648 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 ABI2Q9NYB9 513 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 L1RE1Q9UN81 338 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 DCHS1Q96JQ0 3298 aa13.04□□□□□ -0.32
SQSTM1-207ENST00000481335 PVALEFA0A1B0GWK0 134 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 MYBPHLA2RUH7 354 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 FAM163BP0C2L3 166 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 CCR3P51677 355 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 NRLP54845 237 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 BFSP1Q12934 665 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 DUOXA2Q1HG44 320 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 RALGPS2Q86X27 583 aaPredicted RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 ADGRF2Q8IZF7 708 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 CELF5Q8N6W0 485 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 BPIFB1Q8TDL5 484 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 RUBCNQ92622 972 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 TRMT2BQ96GJ1 504 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 MYRFLQ96LU7 910 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 THG1LQ9NWX6 298 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 HSPBP1Q9NZL4 362 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 TFIP11Q9UBB9 837 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 R4GN57 208 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 NCANO14594 1321 aa13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-207ENST00000481335 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 GOLGA8JA6NMD2 632 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 LILRB5O75023 590 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 SOAT2O75908 522 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 PAPSS2O95340 614 aaPredicted RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 KRT19P08727 400 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 AVPR1AP37288 418 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 MAGEA11P43364 429 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 CSTF1Q05048 431 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 ZNF268Q14587 947 aaPredicted RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 SNRNP35Q16560 246 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 DGKKQ5KSL6 1271 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 STXBP5Q5T5C0 1151 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 RESP18Q5W5W9 173 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 C4orf50Q6ZRC1 276 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 CMTM8Q8IZV2 173 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 SYNPOQ8N3V7 929 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 ATRIPQ8WXE1 791 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 PKMYT1Q99640 499 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 AGPAT3Q9NRZ7 376 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 DMXL1Q9Y485 3027 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 CACNA1AO00555 2505 aa13.02□□□□□ -0.33
SQSTM1-207ENST00000481335 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 NOL4O94818 638 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 F11P03951 625 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 MYL1P05976 194 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CHRNB1P11230 501 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 PFKLP17858 780 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CCNE1P24864 410 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CTHP32929 405 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 HOXD13P35453 343 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 ME1P48163 572 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 NLRP12P59046 1061 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CYP4F8P98187 520 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 MTAPQ13126 283 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 PSMD6Q15008 389 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 VSTM1Q6UX27 236 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 SPATA2LQ8IUW3 424 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 SUMF1Q8NBK3 374 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 GOLGA5Q8TBA6 731 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 TMEM174Q8WUU8 243 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 SECISBP2LQ93073 1101 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 RSPRY1Q96DX4 576 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 FNBP1Q96RU3 617 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 EPC1Q9H2F5 836 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms