RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 BTN3A1O00481 513 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 SGSM2O43147 1006 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 ADAM20O43506 726 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 SEC22BO75396 215 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 TMIGD3P0DMS9 266 aaPredicted RBP8.74□□□□□ -1.01
LSM5-210ENST00000480956 GRK5P34947 590 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 GSK3AP49840 483 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 NAA25Q14CX7 972 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 MEX3CQ5U5Q3 659 aaKnown RBP8.74□□□□□ -1.01
LSM5-210ENST00000480956 MTFR2Q6P444 385 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 ZER1Q7Z7L7 766 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 METTL23Q86XA0 190 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 PPP1R3BQ86XI6 285 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 RNF168Q8IYW5 571 aaPredicted RBP8.74□□□□□ -1.01
LSM5-210ENST00000480956 ANKRD20A12PQ8NF67 263 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 KTI12Q96EK9 354 aaPredicted RBP8.74□□□□□ -1.01
LSM5-210ENST00000480956 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
LSM5-210ENST00000480956 THUMPD3Q9BV44 507 aaKnown RBP8.74□□□□□ -1.01
LSM5-210ENST00000480956 MAK16Q9BXY0 300 aaKnown RBP8.74□□□□□ -1.01
LSM5-210ENST00000480956 THAP9Q9H5L6 903 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 SMURF2Q9HAU4 748 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 SLC35C2Q9NQQ7 365 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 C5AR2Q9P296 337 aa8.74□□□□□ -1.01
LSM5-210ENST00000480956 H0YAE9 185 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 SART1O43290 800 aaKnown RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 ADAM11O75078 769 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 PCDH8O95206 1070 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 METTL18O95568 372 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 CELA3BP08861 270 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 TNNT1P13805 278 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 EGR1P18146 543 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 IL4RP24394 825 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 SSR1P43307 286 aaKnown RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 ZNF200P98182 395 aaPredicted RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 ACTN3Q08043 901 aaPredicted RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 DCTN2Q13561 401 aaKnown RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 NFE2L1Q14494 772 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 GRIK5Q16478 980 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 TAF2Q6P1X5 1199 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 SLC30A9Q6PML9 568 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 OTUD6AQ7L8S5 288 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 GPR149Q86SP6 731 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 METTL6Q8TCB7 284 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 ATP6V0A1Q93050 837 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 PPP1R13BQ96KQ4 1090 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 CHST8Q9H2A9 424 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 MMADHCQ9H3L0 296 aaPredicted RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 LIN28AQ9H9Z2 209 aaKnown RBP8.73□□□□□ -1.01
LSM5-210ENST00000480956 G6PC2Q9NQR9 355 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 PLA2G3Q9NZ20 509 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 NDUFAF4Q9P032 175 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 FAM184BQ9ULE4 1060 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 USP18Q9UMW8 372 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 DNAJC16Q9Y2G8 782 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 TRIM17Q9Y577 477 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 MYPNQ86TC9 1320 aa8.73□□□□□ -1.01
LSM5-210ENST00000480956 PRAMEF25A6NGN4 478 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 DNPH1O43598 174 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 UBL4AP11441 157 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 C6P13671 934 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 IL1R1P14778 569 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 SYN1P17600 705 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 TFEBP19484 476 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 CYP7A1P22680 504 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 GGT5P36269 586 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 GP5P40197 560 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 TKTL1P51854 596 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 SOX8P57073 446 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 C17orf67Q0P5P2 114 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 TRIM71Q2Q1W2 868 aaKnown RBP8.72□□□□□ -1.01
LSM5-210ENST00000480956 HSP90AB3PQ58FF7 597 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 GARNL3Q5VVW2 1013 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 RAB11FIP2Q7L804 512 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 ULK2Q8IYT8 1036 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 SCML4Q8N228 414 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 ZNF655Q8N720 491 aaPredicted RBP8.72□□□□□ -1.01
LSM5-210ENST00000480956 GABPB2Q8TAK5 448 aaPredicted RBP8.72□□□□□ -1.01
LSM5-210ENST00000480956 SCFD2Q8WU76 684 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 C3orf49Q96BT1 292 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 MRGPRX4Q96LA9 322 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 HDAC8Q9BY41 377 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 ZNF518BQ9C0D4 1074 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 RANBP17Q9H2T7 1088 aaKnown RBP8.72□□□□□ -1.01
LSM5-210ENST00000480956 TP63Q9H3D4 680 aaPredicted RBP8.72□□□□□ -1.01
LSM5-210ENST00000480956 RIC8BQ9NVN3 520 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 AKAP7Q9P0M2 348 aaPredicted RBP8.72□□□□□ -1.01
LSM5-210ENST00000480956 LAMP5Q9UJQ1 280 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 CCL27Q9Y4X3 112 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 PAXBP1Q9Y5B6 917 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 AP1M2Q9Y6Q5 423 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 UNC13AQ9UPW8 1703 aa8.72□□□□□ -1.01
LSM5-210ENST00000480956 VWA3AA6NCI4 1184 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 A8MV72 311 aaPredicted RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 E7EVH7 732 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 PYCARD-AS1I3L0S3 204 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 TM4SF5O14894 197 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 CSPG5O95196 566 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 SFTPCP11686 197 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms