RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 HCRTO43612 131 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 C1RP00736 705 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 CYP11B1P15538 503 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 DNAJB1P25685 340 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 ANXA13P27216 316 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 USP8P40818 1118 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 NDUFV1P49821 464 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 NFE2Q16621 373 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 ZNF394Q53GI3 561 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 SGO2Q562F6 1265 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 WDR59Q6PJI9 974 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 ACOT1Q86TX2 421 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 DCP1BQ8IZD4 617 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 DDX1Q92499 740 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 FUBP3Q96I24 572 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 TCF25Q9BQ70 676 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 MTCL1Q9Y4B5 1905 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 MYH10P35580 1976 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 SSU72P8A0A1W2PR75 194 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 O00370 1275 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 MED7O43513 233 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 SERPING1P05155 500 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ERVFC1P60507 584 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ROR1Q01973 937 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 GPR17Q13304 367 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ORC1Q13415 861 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 TSR1Q2NL82 804 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 CFAP221Q4G0U5 840 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 TPGS2Q68CL5 300 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 TMC7Q7Z402 723 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 OLIG1Q8TAK6 271 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 C2orf15Q8WU43 125 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF606Q8WXB4 792 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ARNTL2Q8WYA1 636 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 TFAP2BQ92481 460 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ENTPD7Q9NQZ7 604 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNHIT6Q9NWK9 470 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 HSFX1Q9UBD0 423 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 MAFFQ9ULX9 164 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 TRANK1O15050 2925 aa13.33□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 MYBPHLA2RUH7 354 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 C2orf71A6NGG8 1288 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 EPOPA6NHQ4 379 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 LPXNO60711 386 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 ATP2C2O75185 946 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 ABLIM3O94929 683 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 CPB1P15086 417 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 CD19P15391 556 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 CDR2Q01850 454 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 GOLGA8FQ08AF8 430 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 GOLGA8DPQ0D2H9 430 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 KLHL30Q0D2K2 578 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 RAB33AQ14088 237 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 CNGA2Q16280 664 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 MDH1BQ5I0G3 518 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 LCLAT1Q6UWP7 414 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 CCDC186Q7Z3E2 898 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 NOP9Q86U38 636 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 TMEM139Q8IV31 216 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 MRPL43Q8N983 215 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 HEXIM2Q96MH2 286 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 MYO9BQ13459 2157 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
TRAPPC12-218ENST00000479897 WDR27A2RRH5 827 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 MTMR11A4FU01 709 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 C2CD2LO14523 706 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 TEX28O15482 410 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 ADAM12O43184 909 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 THAP12O43422 761 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 ADH1AP07327 375 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms