RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 HSP90AB2PQ58FF8 381 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 DACT2Q5SW24 774 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 NAIF1Q69YI7 327 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 SLC4A10Q6U841 1118 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 HTR3DQ70Z44 454 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ZBTB34Q8NCN2 500 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 RUNDC1Q96C34 613 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ACO2Q99798 780 aaKnown RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 LMBRD1Q9NUN5 540 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 AURKAIP1Q9NWT8 199 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 FEZ2Q9UHY8 353 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 TESMINQ9Y4I5 508 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 PLEKHH1Q9ULM0 1364 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 RNF123Q5XPI4 1314 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 MYBP10242 640 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 HUNKP57058 714 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 SNAPC2Q13487 334 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 CSRP2Q16527 193 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 HEATR3Q7Z4Q2 680 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 NLGN4YQ8NFZ3 816 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-207ENST00000478913 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 CCDC136Q96JN2 1154 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 PHACTR3Q96KR7 559 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 FAM167AQ96KS9 214 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 FAM193BQ96PV7 902 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-207ENST00000478913 CGRRF1Q99675 332 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 NDC1Q9BTX1 674 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 C1orf112Q9NSG2 853 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 ABCF2Q9UG63 623 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 EIF2B4Q9UI10 523 aaKnown RBP6.3□□□□□ -1.4
CCDC171-207ENST00000478913 TSC22D4Q9Y3Q8 395 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
CCDC171-207ENST00000478913 KIAA0100Q14667 2235 aaKnown RBP6.3□□□□□ -1.4
CCDC171-207ENST00000478913 XDHP47989 1333 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 AKAP12Q02952 1782 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 ZDBF2Q9HCK1 2354 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 UBXN7O94888 489 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 FTH1P19P0C7X4 201 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 KNDC1Q76NI1 1749 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
CCDC171-207ENST00000478913 PPP1R35Q8TAP8 253 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 C8orf48Q96LL4 319 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 WDCPQ9H6R7 721 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 FBXO34Q9NWN3 711 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
CCDC171-207ENST00000478913 C5orf42Q9H799 3197 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 DRGXA6NNA5 263 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 H3BUI4 141 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 F2RL2O00254 374 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 HAUS5O94927 633 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 ITGB1P05556 798 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 SBK3P0C264 359 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 HTR1BP28222 390 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 APOBEC3AP31941 199 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-207ENST00000478913 CHN2P52757 468 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 TMF1P82094 1093 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 CDSNQ15517 529 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 FLYWCH1Q4VC44 716 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 USP39Q53GS9 565 aaKnown RBP6.28□□□□□ -1.4
CCDC171-207ENST00000478913 SPDYAQ5MJ70 313 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 MED25Q71SY5 747 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 SYT12Q8IV01 421 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 SH2D3CQ8N5H7 860 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 KLHDC4Q8TBB5 520 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 MTFMTQ96DP5 389 aaKnown RBP6.28□□□□□ -1.4
CCDC171-207ENST00000478913 REXO4Q9GZR2 422 aaKnown RBP6.28□□□□□ -1.4
CCDC171-207ENST00000478913 GNL3LQ9NVN8 582 aaKnown RBP6.28□□□□□ -1.4
CCDC171-207ENST00000478913 OBP2AQ9NY56 170 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 GABBR1Q9UBS5 961 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 SORCS3Q9UPU3 1222 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 KMT2BQ9UMN6 2715 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-207ENST00000478913 HTTP42858 3142 aa6.28□□□□□ -1.4
CCDC171-207ENST00000478913 ARFGEF1Q9Y6D6 1849 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 CDHR4A6H8M9 788 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 NT5C1B-RDH14C9J2C7 533 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 LEFTY2O00292 366 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 B3GALT2O43825 422 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 RECQL4O94761 1208 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 TYRP14679 529 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 NHLH2Q02577 135 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 RGMBQ6NW40 437 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 TMPRSS6Q8IU80 811 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 C1orf210Q8IVY1 113 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 FITM2Q8N6M3 262 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 IL17RDQ8NFM7 739 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 SLC35A4Q96G79 324 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 DCLRE1CQ96SD1 692 aaKnown RBP6.27□□□□□ -1.41
CCDC171-207ENST00000478913 GSTO2Q9H4Y5 243 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 PNPOQ9NVS9 261 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 SIDT1Q9NXL6 827 aaKnown RBP6.27□□□□□ -1.41
CCDC171-207ENST00000478913 TIAM2Q8IVF5 1701 aa6.27□□□□□ -1.41
CCDC171-207ENST00000478913 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms