RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PARVGQ9HBI0 331 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 FBRSL1Q9HCM7 1045 aaKnown RBP22.09■■□□□ 1.13
VPS36-203ENST00000475375 PCDHB5Q9Y5E4 795 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 TSC2P49815 1807 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 ATG2BQ96BY7 2078 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 SCP2P22307 547 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 GALK1P51570 392 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 PSMD2Q13200 908 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 RILPL1Q5EBL4 403 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 TMEM150AQ86TG1 271 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 STKLD1Q8NE28 680 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 RPLP0P6Q8NHW5 317 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 CHFRQ96EP1 664 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 DPP3Q9NY33 737 aa22.08■■□□□ 1.13
VPS36-203ENST00000475375 RALYQ9UKM9 306 aaKnown RBP22.08■■□□□ 1.13
VPS36-203ENST00000475375 DCLK1O15075 740 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 TRAK2O60296 914 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 PRPF40AO75400 957 aaKnown RBP22.07■■□□□ 1.12
VPS36-203ENST00000475375 RHOBTB1O94844 696 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 F11P03951 625 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 GBP1P32455 592 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 GPR15P49685 360 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 TSPY1Q01534 308 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 PDGFRLQ15198 375 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 NAIF1Q69YI7 327 aaPredicted RBP22.07■■□□□ 1.12
VPS36-203ENST00000475375 ADALQ6DHV7 355 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 SLC39A4Q6P5W5 647 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 CPA6Q8N4T0 437 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 PI4K2AQ9BTU6 479 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 DUSP15Q9H1R2 295 aaPredicted RBP22.07■■□□□ 1.12
VPS36-203ENST00000475375 ASB7Q9H672 318 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 ANK1P16157 1881 aa22.07■■□□□ 1.12
VPS36-203ENST00000475375 TBCAO75347 108 aaKnown RBP22.06■■□□□ 1.12
VPS36-203ENST00000475375 SEC24BO95487 1268 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 APBB3O95704 486 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 HMGA1P17096 107 aaKnown RBP22.06■■□□□ 1.12
VPS36-203ENST00000475375 NOVA1P51513 510 aaKnown RBP22.06■■□□□ 1.12
VPS36-203ENST00000475375 KARSQ15046 597 aaKnown RBP22.06■■□□□ 1.12
VPS36-203ENST00000475375 SV2CQ496J9 727 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 FBXO43Q4G163 708 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 SDHAF4Q5VUM1 108 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 MON1AQ86VX9 555 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 RASSF8Q8NHQ8 419 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 KCNN1Q92952 543 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 CALML4Q96GE6 196 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 TRPC7Q9HCX4 862 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 C2CD2Q9Y426 696 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 KIF3AQ9Y496 699 aa22.06■■□□□ 1.12
VPS36-203ENST00000475375 ANKRD63C9JTQ0 380 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 CAVIN2O95810 425 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 CSH1P0DML2 217 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 CSH2P0DML3 217 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 GJA4P35212 333 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 DMC1Q14565 340 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 RIN3Q8TB24 985 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 ACDQ96AP0 544 aa22.05■■□□□ 1.12
VPS36-203ENST00000475375 DUS2Q9NX74 493 aaKnown RBP22.05■■□□□ 1.12
VPS36-203ENST00000475375 AGO2Q9UKV8 859 aaKnown RBP22.05■■□□□ 1.12
VPS36-203ENST00000475375 SCN1AP35498 2009 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 C4orf47A7E2U8 309 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 KPNA7A9QM74 516 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 TISP43B9A030 160 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 NEFLP07196 543 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 PROS1P07225 676 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ABCD1P33897 745 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 UBA7P41226 1012 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 IFNAR2P48551 515 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 DGKEP52429 567 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ZNF131P52739 623 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ZNF268Q14587 947 aaPredicted RBP22.04■■□□□ 1.12
VPS36-203ENST00000475375 MTF1Q14872 753 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ARL6IP4Q66PJ3 421 aaKnown RBP22.04■■□□□ 1.12
VPS36-203ENST00000475375 SLFN12LQ6IEE8 588 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 SYT13Q7L8C5 426 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ZNF560Q96MR9 790 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ECT2Q9H8V3 914 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 TMLHEQ9NVH6 421 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 UXTQ9UBK9 157 aaPredicted RBP22.04■■□□□ 1.12
VPS36-203ENST00000475375 INVSQ9Y283 1065 aa22.04■■□□□ 1.12
VPS36-203ENST00000475375 ZNF638Q14966 1978 aaKnown RBP22.03■■□□□ 1.12
VPS36-203ENST00000475375 MCM6Q14566 821 aa22.03■■□□□ 1.12
VPS36-203ENST00000475375 NFE2Q16621 373 aaPredicted RBP22.03■■□□□ 1.12
VPS36-203ENST00000475375 DDR2Q16832 855 aa22.03■■□□□ 1.12
VPS36-203ENST00000475375 ZC2HC1CQ53FD0 456 aaPredicted RBP22.03■■□□□ 1.12
VPS36-203ENST00000475375 DAB2IPQ5VWQ8 1189 aa22.03■■□□□ 1.12
VPS36-203ENST00000475375 CD101Q93033 1021 aa22.03■■□□□ 1.12
VPS36-203ENST00000475375 ATP2A3Q93084 1043 aa22.03■■□□□ 1.12
VPS36-203ENST00000475375 WNT6Q9Y6F9 365 aa22.03■■□□□ 1.12
VPS36-203ENST00000475375 BCLAF3A2AJT9 711 aaKnown RBP22.02■■□□□ 1.12
VPS36-203ENST00000475375 SOBPA7XYQ1 873 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 GIPC1O14908 333 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 CKMP06732 381 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 RPL10AP62906 217 aaKnown RBP22.02■■□□□ 1.12
VPS36-203ENST00000475375 GTF2BQ00403 316 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 FAM160A1Q05DH4 1040 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 ZNF252P-AS1Q0IIN9 211 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 TSTD1Q8NFU3 115 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 OSCP1Q8WVF1 389 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 AK8Q96MA6 479 aa22.02■■□□□ 1.12
VPS36-203ENST00000475375 CCSER1Q9C0I3 900 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms