RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PPEF2O14830 753 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 FAM189A1O60320 539 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 GBP1P32455 592 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 TOB1P50616 345 aaPredicted RBP13.6□□□□□ -0.23
SKA3-206ENST00000475251 GALK1P51570 392 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 SLC12A3P55017 1021 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 TSPY1Q01534 308 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 ZNF252P-AS1Q0IIN9 211 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 NFE2Q16621 373 aaPredicted RBP13.6□□□□□ -0.23
SKA3-206ENST00000475251 USP39Q53GS9 565 aaKnown RBP13.6□□□□□ -0.23
SKA3-206ENST00000475251 TRIM68Q6AZZ1 485 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 MON1AQ86VX9 555 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 TMEM130Q8N3G9 435 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 CD101Q93033 1021 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 ATP2A3Q93084 1043 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
SKA3-206ENST00000475251 PYM1Q9BRP8 204 aaKnown RBP13.6□□□□□ -0.23
SKA3-206ENST00000475251 CCSER1Q9C0I3 900 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 CNOT1A5YKK6 2376 aaKnown RBP13.59□□□□□ -0.23
SKA3-206ENST00000475251 KHNYNO15037 678 aaKnown RBP13.59□□□□□ -0.23
SKA3-206ENST00000475251 SLC26A4O43511 780 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 FAM13AO94988 1023 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 F11P03951 625 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 NFICP08651 508 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 CEACAM1P13688 526 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 GJA4P35212 333 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 IFNAR2P48551 515 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
SKA3-206ENST00000475251 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
SKA3-206ENST00000475251 FAM160A1Q05DH4 1040 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 FOXC1Q12948 553 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 NR1H3Q13133 447 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 PSMD2Q13200 908 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 DMC1Q14565 340 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 MTF1Q14872 753 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 IL17AQ16552 155 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 SV2CQ496J9 727 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 RILPL1Q5EBL4 403 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 SLFN12LQ6IEE8 588 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 TCEAL6Q6IPX3 200 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 KDF1Q8NAX2 398 aaPredicted RBP13.59□□□□□ -0.23
SKA3-206ENST00000475251 TSTD1Q8NFU3 115 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 OSCP1Q8WVF1 389 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 TCEAL3Q969E4 200 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 CHFRQ96EP1 664 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 ZNF560Q96MR9 790 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 TMEM9BQ9NQ34 198 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.59□□□□□ -0.23
SKA3-206ENST00000475251 ZMIZ1Q9ULJ6 1067 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
SKA3-206ENST00000475251 EML5Q05BV3 1969 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 LNP1A1A4G5 178 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 OTOL1A6NHN0 477 aaPredicted RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 C1QTNF9BB2RNN3 333 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 C1QTNF9P0C862 333 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 ARSAP15289 507 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 NMT1P30419 496 aaKnown RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 PNPLA4P41247 253 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 PDE6CP51160 858 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 DGKEP52429 567 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 ATP2C1P98194 919 aaPredicted RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 SH3PXD2AQ5TCZ1 1133 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 TXNDC8Q6A555 127 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 TMEM150AQ86TG1 271 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 NT5DC4Q86YG4 428 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 MYCT1Q8N699 235 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 PNMA5Q96PV4 448 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 PARVGQ9HBI0 331 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 ABCB6Q9NP58 842 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 DUS2Q9NX74 493 aaKnown RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 DENND4CQ5VZ89 1909 aa13.58□□□□□ -0.24
SKA3-206ENST00000475251 ZNF638Q14966 1978 aaKnown RBP13.58□□□□□ -0.24
SKA3-206ENST00000475251 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 TRAK2O60296 914 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 TBCAO75347 108 aaKnown RBP13.57□□□□□ -0.24
SKA3-206ENST00000475251 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
SKA3-206ENST00000475251 KRT18P05783 430 aaKnown RBP13.57□□□□□ -0.24
SKA3-206ENST00000475251 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 ZNF131P52739 623 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 ARL6IP4Q66PJ3 421 aaKnown RBP13.57□□□□□ -0.24
SKA3-206ENST00000475251 PMS2CLQ68D20 193 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 ADALQ6DHV7 355 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 CYP2U1Q7Z449 544 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 LRRTM3Q86VH5 581 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 FSIP1Q8NA03 581 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 LEO1Q8WVC0 666 aaPredicted RBP13.57□□□□□ -0.24
SKA3-206ENST00000475251 CALML4Q96GE6 196 aa13.57□□□□□ -0.24
SKA3-206ENST00000475251 TRMT2BQ96GJ1 504 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms